| Emu: species-level microbial community profiling of full-length 16S rRNA Oxford Nanopore sequencing data KD Curry, Q Wang, MG Nute, A Tyshaieva, E Reeves, S Soriano, Q Wu, ... Nature methods 19 (7), 845-853, 2022 | 89 | 2022 |
| To petabytes and beyond: recent advances in probabilistic and signal processing algorithms and their application to metagenomics RAL Elworth, Q Wang, PK Kota, CJ Barberan, B Coleman, A Balaji, ... Nucleic acids research 48 (10), 5217-5234, 2020 | 34 | 2020 |
| SARS-CoV-2 genomic diversity and the implications for qRT-PCR diagnostics and transmission N Sapoval, M Mahmoud, MD Jochum, Y Liu, RAL Elworth, Q Wang, ... Genome research 31 (4), 635-644, 2021 | 33 | 2021 |
| Hidden genomic diversity of SARS-CoV-2: implications for qRT-PCR diagnostics and transmission N Sapoval, M Mahmoud, MD Jochum, Y Liu, RAL Elworth, Q Wang, ... BioRxiv, 2020 | 24 | 2020 |
| Alterations to the gut microbiome after sport-related concussion in a collegiate football players cohort: A pilot study S Soriano, K Curry, SS Sadrameli, Q Wang, M Nute, E Reeves, R Kabir, ... Brain, Behavior, & Immunity-Health 21, 100438, 2022 | 17 | 2022 |
| Fecal microbiota transplantation derived from Alzheimer’s disease mice worsens brain trauma outcomes in wild-type controls S Soriano, K Curry, Q Wang, E Chow, TJ Treangen, S Villapol International Journal of Molecular Sciences 23 (9), 4476, 2022 | 16 | 2022 |
| PlasmidHawk improves lab of origin prediction of engineered plasmids using sequence alignment Q Wang, B Kille, TR Liu, RAL Elworth, TJ Treangen Nature communications 12 (1), 1167, 2021 | 14 | 2021 |
| Faster pan-genome construction for efficient differentiation of naturally occurring and engineered plasmids with plaster Q Wang, RA Elworth, TR Liu, TJ Treangen 19th International Workshop on Algorithms in Bioinformatics (WABI 2019), 2019 | 6 | 2019 |
| PlasmidHawk: Alignment-based Lab-of-Origin Prediction of Synthetic Plasmids Q Wang, TR Liu, RA Leo Elworth, TJ Treangen BioRxiv, 2020.05. 22.110270, 2020 | 2 | 2020 |
| Sensitivity and consistency of long-and short-read metagenomics and epicPCR for the detection of antibiotic resistance genes and their bacterial hosts in wastewater EG Lou, Y Fu, Q Wang, TJ Treangen, LB Stadler Journal of Hazardous Materials 469, 133939, 2024 | 1 | 2024 |
| Bakdrive: Identifying the Minimum Set of Bacterial Driver Species across Multiple Microbial Communities Q Wang, M Nute, T Treangen bioRxiv, 2021.09. 24.461746, 2021 | 1 | 2021 |
| Bakdrive: identifying a minimum set of bacterial species driving interactions across multiple microbial communities Q Wang, M Nute, TJ Treangen Bioinformatics 39 (Supplement_1), i47-i56, 2023 | | 2023 |
| Emu: species-level microbial community profiling of full-length 16S rRNA Oxford Nanopore sequencing data KD Curry, Q Wang, MG Nute, A Tyshaieva, E Reeves, S Soriano, Q Wu, ... Nature Methods 19 (7), 845-853, 2022 | | 2022 |
| Hidden genomic diversity of SARS-CoV-2: implications for qRT-PCR diagnostics and transmission (preprint) N Sapoval, M Mahmoud, MD Jochum, Y Liu, RAL Elworth, Q Wang, ... | | 2020 |
Todd J. TreangenAssociate Professor, Department of Computer Science, Rice UniversityVerified email at rice.edu
