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Harshil Patel
Harshil Patel
Head of Scientific Development, Seqera Labs
Verified email at seqera.io - Homepage
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Cited by
Year
The nf-core framework for community-curated bioinformatics pipelines
PA Ewels, A Peltzer, S Fillinger, H Patel, J Alneberg, A Wilm, MU Garcia, ...
Nature biotechnology 38 (3), 276-278, 2020
10952020
Influenza-induced monocyte-derived alveolar macrophages confer prolonged antibacterial protection
H Aegerter, J Kulikauskaite, S Crotta, H Patel, G Kelly, EM Hessel, ...
Nature immunology 21 (2), 145-157, 2020
2492020
Chromatin controls DNA replication origin selection, lagging-strand synthesis, and replication fork rates
CF Kurat, JTP Yeeles, H Patel, A Early, JFX Diffley
Molecular cell 65 (1), 117-130, 2017
2422017
SETD2 loss-of-function promotes renal cancer branched evolution through replication stress and impaired DNA repair
N Kanu, E Grönroos, P Martinez, RA Burrell, X Yi Goh, J Bartkova, ...
Oncogene 34 (46), 5699-5708, 2015
1832015
The linker histone H1. 0 generates epigenetic and functional intratumor heterogeneity
CM Torres, A Biran, MJ Burney, H Patel, T Henser-Brownhill, AHS Cohen, ...
Science 353 (6307), aaf1644, 2016
1692016
The Scc2–Scc4 complex acts in sister chromatid cohesion and transcriptional regulation by maintaining nucleosome-free regions
L Lopez-Serra, G Kelly, H Patel, A Stewart, F Uhlmann
Nature genetics 46 (10), 1147-1151, 2014
1512014
ATAD3 gene cluster deletions cause cerebellar dysfunction associated with altered mitochondrial DNA and cholesterol metabolism
R Desai, AE Frazier, R Durigon, H Patel, AW Jones, I Dalla Rosa, NJ Lake, ...
Brain 140 (6), 1595-1610, 2017
1292017
Defective ALC1 nucleosome remodeling confers PARPi sensitization and synthetic lethality with HRD
G Hewitt, V Borel, S Segura-Bayona, T Takaki, P Ruis, R Bellelli, ...
Molecular cell 81 (4), 767-783. e11, 2021
842021
A role for chromatin remodeling in cohesin loading onto chromosomes
S Muñoz, M Minamino, CS Casas-Delucchi, H Patel, F Uhlmann
Molecular cell 74 (4), 664-673. e5, 2019
832019
Challenges to be faced in the reconstruction of metabolic networks from public databases
MG Poolman, BK Bonde, A Gevorgyan, HH Patel, DA Fell
IEE Proceedings-Systems Biology 153 (5), 379-384, 2006
792006
Targeting the nucleotide salvage factor DNPH1 sensitizes BRCA-deficient cells to PARP inhibitors
K Fugger, I Bajrami, M Silva Dos Santos, SJ Young, S Kunzelmann, ...
Science 372 (6538), 156-165, 2021
742021
Genome-wide co-localization of Polycomb orthologs and their effects on gene expression in human fibroblasts
H Pemberton, E Anderton, H Patel, S Brookes, H Chandler, R Palermo, ...
Genome biology 15 (2), 1-16, 2014
652014
A systematic benchmark of Nanopore long read RNA sequencing for transcript level analysis in human cell lines
Y Chen, NM Davidson, YK Wan, H Patel, F Yao, HM Low, C Hendra, ...
BioRxiv, 2021
592021
Functional antibody and T cell immunity following SARS-CoV-2 infection, including by variants of concern, in patients with cancer: the CAPTURE study
A Fendler, L Au, STC Shepherd, F Byrne, M Cerrone, LA Boos, ...
Nature Cancer 2 (12), 1321-1337, 2021
562021
Distinct modes of SMAD2 chromatin binding and remodeling shape the transcriptional response to NODAL/Activin signaling
DM Coda, T Gaarenstroom, P East, H Patel, DSJ Miller, A Lobley, ...
Elife 6, e22474, 2017
492017
Epstein–Barr virus transcription factor Zta acts through distal regulatory elements to directly control cellular gene expression
S Ramasubramanyan, K Osborn, R Al-Mohammad, ...
Nucleic acids research 43 (7), 3563-3577, 2015
492015
Division of labor between PCNA loaders in DNA replication and sister chromatid cohesion establishment
HW Liu, C Bouchoux, M Panarotto, Y Kakui, H Patel, F Uhlmann
Molecular cell 78 (4), 725-738. e4, 2020
472020
Cyclin D mediates tolerance of genome-doubling in cancers with functional p53
A Crockford, LP Zalmas, E Grönroos, SM Dewhurst, N McGranahan, ...
Annals of Oncology 28 (1), 149-156, 2017
472017
RTEL1 Regulates G4/R-Loops to Avert Replication-Transcription Collisions
P Kotsantis, S Segura-Bayona, P Margalef, P Marzec, P Ruis, G Hewitt, ...
Cell reports 33 (12), 108546, 2020
442020
Characterisation of tumour microenvironment remodelling following oncogene inhibition in preclinical studies with imaging mass cytometry
F Van Maldegem, K Valand, M Cole, H Patel, M Angelova, S Rana, ...
Nature Communications 12 (1), 1-14, 2021
422021
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Articles 1–20