Nozomu Yachie
Nozomu Yachie
Associate Professor, The University of Tokyo
Verified email at synbiol.rcast.u-tokyo.ac.jp - Homepage
TitleCited byYear
Targeted nucleotide editing using hybrid prokaryotic and vertebrate adaptive immune systems
K Nishida, T Arazoe, N Yachie, S Banno, M Kakimoto, M Tabata, ...
Science 353 (6305), aaf8729, 2016
4592016
Widespread macromolecular interaction perturbations in human genetic disorders
N Sahni, S Yi, M Taipale, JIF Bass, J Coulombe-Huntington, F Yang, ...
Cell 161 (3), 647-660, 2015
2622015
Engineered CRISPR-Cas9 nuclease with expanded targeting space
H Nishimasu, X Shi, S Ishiguro, L Gao, S Hirano, S Okazaki, T Noda, ...
Science 361 (6408), 1259-1262, 2018
1662018
Permuted tRNA genes expressed via a circular RNA intermediate in Cyanidioschyzon merolae
A Soma, A Onodera, J Sugahara, A Kanai, N Yachie, M Tomita, ...
Science 318 (5849), 450-453, 2007
1022007
Alignment‐Based Approach for Durable Data Storage into Living Organisms
N Yachie, K Sekiyama, J Sugahara, Y Ohashi, M Tomita
Biotechnology progress 23 (2), 501-505, 2007
752007
Bioinformatic analysis of post‐transcriptional regulation by uORF in human and mouse
M Matsui, N Yachie, Y Okada, R Saito, M Tomita
FEBS letters 581 (22), 4184-4188, 2007
712007
Comprehensive analysis of archaeal tRNA genes reveals rapid increase of tRNA introns in the order thermoproteales
J Sugahara, K Kikuta, K Fujishima, N Yachie, M Tomita, A Kanai
Molecular biology and evolution 25 (12), 2709-2716, 2008
662008
SPLITS: a new program for predicting split and intron-containing tRNA genes at the genome level
J Sugahara, N Yachie, Y Sekine, A Soma, M Matsui, M Tomita, A Kanai
In silico biology 6 (5), 411-418, 2006
572006
Computational analysis of microRNA‐mediated antiviral defense in humans
Y Watanabe, A Kishi, N Yachie, A Kanai, M Tomita
FEBS letters 581 (24), 4603-4610, 2007
552007
Prediction of liquid chromatographic retention times of peptides generated by protease digestion of the Escherichia coli proteome using artificial neural networks
K Shinoda, M Sugimoto, N Yachie, N Sugiyama, T Masuda, M Robert, ...
Journal of proteome research 5 (12), 3312-3317, 2006
552006
Pooled‐matrix protein interaction screens using Barcode Fusion Genetics
N Yachie, E Petsalaki, JC Mellor, J Weile, Y Jacob, M Verby, SB Ozturk, ...
Molecular systems biology 12 (4), 2016
522016
In silico screening of archaeal tRNA-encoding genes having multiple introns with bulge-helix-bulge splicing motifs
J Sugahara, N Yachie, K Arakawa, M Tomita
Rna 13 (5), 671-681, 2007
502007
Computational analysis of microRNA targets in Caenorhabditis elegans
Y Watanabe, N Yachie, K Numata, R Saito, A Kanai, M Tomita
Gene 365, 2-10, 2006
502006
Prediction of non-coding and antisense RNA genes in Escherichia coli with Gapped Markov Model
N Yachie, K Numata, R Saito, A Kanai, M Tomita
Gene 372, 171-181, 2006
492006
Integrative features of the yeast phosphoproteome and protein–protein interaction map
N Yachie, R Saito, N Sugiyama, M Tomita, Y Ishihama
PLoS computational biology 7 (1), e1001064, 2011
462011
In silico analysis of phosphoproteome data suggests a rich-get-richer process of phosphosite accumulation over evolution
N Yachie, R Saito, J Sugahara, M Tomita, Y Ishihama
Molecular & Cellular Proteomics 8 (5), 1061-1071, 2009
362009
Stabilizing synthetic data in the DNA of living organisms
N Yachie, Y Ohashi, M Tomita
Systems and synthetic biology 2 (1-2), 19-25, 2008
282008
Towards the systematic discovery of signal transduction networks using phosphorylation dynamics data
H Imamura, N Yachie, R Saito, Y Ishihama, M Tomita
BMC bioinformatics 11 (1), 232, 2010
202010
Tight associations between transcription promoter type and epigenetic variation in histone positioning and modification
T Nozaki, N Yachie, R Ogawa, A Kratz, R Saito, M Tomita
BMC genomics 12 (1), 416, 2011
182011
Comprehensive analysis of the SUL1 promoter of Saccharomyces cerevisiae
MS Rich, C Payen, AF Rubin, GT Ong, MR Sanchez, N Yachie, ...
Genetics 203 (1), 191-202, 2016
162016
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Articles 1–20