Follow
Zhenyu Xu
Zhenyu Xu
SOPHiA GENETICS
Verified email at sophiagenetics.com
Title
Cited by
Cited by
Year
Bidirectional promoters generate pervasive transcription in yeast
Z Xu, W Wei, J Gagneur, F Perocchi, S Clauder-Münster, J Camblong, ...
Nature 457 (7232), 1033-1037, 2009
10722009
Widespread bidirectional promoters are the major source of cryptic transcripts in yeast
H Neil, C Malabat, Y d’Aubenton-Carafa, Z Xu, LM Steinmetz, A Jacquier
Nature 457 (7232), 1038-1042, 2009
6852009
Gene loops enhance transcriptional directionality
SM Tan-Wong, JB Zaugg, J Camblong, Z Xu, DW Zhang, HE Mischo, ...
Science 338 (6107), 671-675, 2012
2842012
Extensive degradation of RNA precursors by the exosome in wild-type cells
RK Gudipati, Z Xu, A Lebreton, B Séraphin, LM Steinmetz, A Jacquier, ...
Molecular cell 48 (3), 409-421, 2012
2712012
Antisense artifacts in transcriptome microarray experiments are resolved by actinomycin D
F Perocchi, Z Xu, S Clauder-Münster, LM Steinmetz
Nucleic acids research 35 (19), e128, 2007
2422007
Antisense expression increases gene expression variability and locus interdependency
Z Xu, W Wei, J Gagneur, S Clauder‐Münster, M Smolik, W Huber, ...
Molecular systems biology 7 (1), 468, 2011
2062011
Set3 HDAC mediates effects of overlapping noncoding transcription on gene induction kinetics
TS Kim, Z Xu, S Clauder-Münster, LM Steinmetz, S Buratowski
Cell 150 (6), 1158-1169, 2012
2052012
New insights into the performance of human whole-exome capture platforms
J Meienberg, K Zerjavic, I Keller, M Okoniewski, A Patrignani, K Ludin, ...
Nucleic acids research 43 (11), e76-e76, 2015
1382015
Control of Cdc28 CDK1 by a stress-induced lncRNA
M Nadal-Ribelles, C Solé, Z Xu, LM Steinmetz, E de Nadal, F Posas
Molecular cell 53 (4), 549-561, 2014
1132014
Role of histone modifications and early termination in pervasive transcription and antisense-mediated gene silencing in yeast
M Castelnuovo, JB Zaugg, E Guffanti, A Maffioletti, J Camblong, Z Xu, ...
Nucleic acids research 42 (7), 4348-4362, 2014
632014
Clauder-Mü finster
Z Xu, W Wei, J Gagneur, F Perocchi
S., Camblong, J., Guffanti, E., Stutz, F., Huber, W., and Steinmetz, LM …, 2009
552009
Cross-platform comparison for the detection of RAS mutations in cfDNA (ddPCR Biorad detection assay, BEAMing assay, and NGS strategy)
J Garcia, J Forestier, E Dusserre, AS Wozny, F Geiguer, P Merle, C Tissot, ...
Oncotarget 9 (30), 21122, 2018
532018
A privacy-preserving solution for compressed storage and selective retrieval of genomic data
Z Huang, E Ayday, H Lin, RS Aiyar, A Molyneaux, Z Xu, J Fellay, ...
Genome research 26 (12), 1687-1696, 2016
412016
Transcription mediated insulation and interference direct gene cluster expression switches
T Nguyen, H Fischl, FS Howe, R Woloszczuk, A Serra Barros, Z Xu, ...
Elife 3, e03635, 2014
392014
Recommendations for accurate genotyping of SARS-CoV-2 using amplicon-based sequencing of clinical samples
S Kubik, AC Marques, X Xing, J Silvery, C Bertelli, F De Maio, ...
Clinical Microbiology and Infection 27 (7), 1036. e1-1036. e8, 2021
342021
The role of Ctk1 kinase in termination of small non-coding RNAs
TL Lenstra, A Tudek, S Clauder, Z Xu, ST Pachis, D van Leenen, ...
PLoS One 8 (12), e80495, 2013
242013
Genome-wide H4 K16 acetylation by SAS-I is deposited independently of transcription and histone exchange
F Heise, HR Chung, JM Weber, Z Xu, L Klein-Hitpass, LM Steinmetz, ...
Nucleic acids research 40 (1), 65-74, 2012
202012
Mutational hotspot in the SARS-CoV-2 Spike protein N-terminal domain conferring immune escape potential
S Kubik, N Arrigo, J Bonet, Z Xu
Viruses 13 (11), 2114, 2021
152021
Profiling of circulating tumor DNA in plasma of non‐small cell lung cancer patients, monitoring of epidermal growth factor receptor p. T790M mutated allelic fraction using …
J Garcia, AS Wozny, F Geiguer, A Delherme, D Barthelemy, P Merle, ...
Cancer Medicine 8 (8), 3685-3697, 2019
142019
Single‐cell whole exome and targeted sequencing in NPM1/FLT3 positive pediatric acute myeloid leukemia
C Walter, C Pozzorini, K Reinhardt, R Geffers, Z Xu, D Reinhardt, ...
Pediatric Blood & Cancer 65 (2), e26848, 2018
142018
The system can't perform the operation now. Try again later.
Articles 1–20