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Amy Schmid
Amy Schmid
Duke University Biology Department, Assistant Professor
Bestätigte E-Mail-Adresse bei duke.edu - Startseite
Titel
Zitiert von
Zitiert von
Jahr
A predictive model for transcriptional control of physiology in a free living cell
R Bonneau, MT Facciotti, DJ Reiss, AK Schmid, M Pan, A Kaur, ...
Cell 131 (7), 1354-1365, 2007
3572007
Prevalence of transcription promoters within archaeal operons and coding sequences
T Koide, DJ Reiss, JC Bare, WL Pang, MT Facciotti, AK Schmid, M Pan, ...
Molecular systems biology 5 (1), 285, 2009
1522009
Clustering gene expression time series data using an infinite Gaussian process mixture model
IC McDowell, D Manandhar, CM Vockley, AK Schmid, TE Reddy, ...
PLoS computational biology 14 (1), e1005896, 2018
1512018
Genome-Wide Assessment of Outer Membrane Vesicle Production in Escherichia coli
AJ Kulp, B Sun, T Ai, AJ Manning, N Orench-Rivera, AK Schmid, ...
PloS one 10 (9), e0139200, 2015
912015
Involvement of the S-layer proteins Hpi and SlpA in the maintenance of cell envelope integrity in Deinococcus radiodurans R1
H Rothfuss, JC Lara, AK Schmid, ME Lidstrom
Microbiology 152 (9), 2779-2787, 2006
882006
Archaeal cells share common size control with bacteria despite noisier growth and division
YJ Eun, PY Ho, M Kim, S LaRussa, L Robert, LD Renner, A Schmid, ...
Nature microbiology 3 (2), 148-154, 2018
822018
A single transcription factor regulates evolutionarily diverse but functionally linked metabolic pathways in response to nutrient availability
AK Schmid, DJ Reiss, M Pan, T Koide, NS Baliga
Molecular systems biology 5 (1), 282, 2009
722009
The anatomy of microbial cell state transitions in response to oxygen
AK Schmid, DJ Reiss, A Kaur, M Pan, N King, PT Van, L Hohmann, ...
Genome research 17 (10), 1399-1413, 2007
722007
Detecting differential growth of microbial populations with Gaussian process regression
PD Tonner, CL Darnell, BE Engelhardt, AK Schmid
Genome research 27 (2), 320-333, 2017
642017
Synergistic impacts of organic acids and pH on growth of Pseudomonas aeruginosa: A comparison of parametric and Bayesian non-parametric methods to model growth
FML Bushell, PD Tonner, S Jabbari, AK Schmid, PA Lund
Frontiers in Microbiology 9, 3196, 2019
542019
The RosR transcription factor is required for gene expression dynamics in response to extreme oxidative stress in a hypersaline-adapted archaeon
K Sharma, N Gillum, JL Boyd, A Schmid
BMC genomics 13 (1), 1-18, 2012
532012
Halobacterium salinarum NRC-1 peptideAtlas: Toward strategies for targeted proteomics and improved proteome coverage
T Van Phu, AK Schmid, NL King, A Kaur, M Pan, K Whitehead, T Koide, ...
Journal of Proteome Research 7 (9), 3755-3764, 2008
482008
Halobacterium salinarum NRC-1 PeptideAtlas: toward strategies for targeted proteomics and improved proteome coverage
PT Van, AK Schmid, NL King, A Kaur, M Pan, K Whitehead, T Koide, ...
Journal of proteome research 7 (9), 3755-3764, 2008
482008
The Firegoose: two-way integration of diverse data from different bioinformatics web resources with desktop applications
JC Bare, PT Shannon, AK Schmid, NS Baliga
BMC bioinformatics 8 (1), 1-12, 2007
442007
Transcriptional regulation in archaea: from individual genes to global regulatory networks
M Martinez-Pastor, PD Tonner, CL Darnell, AK Schmid
Annual review of genetics 51 (1), 2017
402017
Two transcription factors are necessary for iron homeostasis in a salt-dwelling archaeon
AK Schmid, M Pan, K Sharma, NS Baliga
Nucleic acids research 39 (7), 2519-2533, 2011
392011
A Regulatory Hierarchy Controls the Dynamic Transcriptional Response to Extreme Oxidative Stress in Archaea
PD Tonner, AMC Pittman, JG Gulli, K Sharma, AK Schmid
PLoS genetics 11 (1), e1004912, 2015
382015
A transcription factor links growth rate and metabolism in the hypersaline adapted archaeon Halobacterium salinarum
H Todor, K Dulmage, N Gillum, JR Bain, MJ Muehlbauer, AK Schmid
Molecular microbiology 93 (6), 1172-1182, 2014
382014
Involvement of two putative alternative sigma factors in stress response of the radioresistant bacterium Deinococcus radiodurans
AK Schmid, ME Lidstrom
Journal of bacteriology 184 (22), 6182-6189, 2002
352002
Involvement of two putative alternative sigma factors in stress response of the radioresistant bacterium Deinococcus radiodurans
AK Schmid, ME Lidstrom
Journal of bacteriology 184 (22), 6182-6189, 2002
352002
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