Bashar Ibrahim
Bashar Ibrahim
Chair of Bioinformatics, Matthias-Schleiden-Institute, University of Jena
Verified email at uni-jena.de - Homepage
TitleCited byYear
Rule-based spatial modeling with diffusing, geometrically constrained molecules
G Gruenert, B Ibrahim, T Lenser, M Lohel, T Hinze, P Dittrich
BMC bioinformatics 11 (1), 307, 2010
922010
Monitoring spindle orientation: Spindle position checkpoint in charge
AK Caydasi, B Ibrahim, G Pereira
Cell division 5 (1), 28, 2010
542010
Elm1 kinase activates the spindle position checkpoint kinase Kin4
AK Caydasi, B Kurtulmus, MIL Orrico, A Hofmann, B Ibrahim, G Pereira
The Journal of cell biology 190 (6), 975-989, 2010
472010
In-silico modeling of the mitotic spindle assembly checkpoint
B Ibrahim, S Diekmann, E Schmitt, P Dittrich
PloS one 3 (2), e1555, 2008
432008
Strategies for preventing type 2 diabetes: an update for clinicians
K Khavandi, H Amer, B Ibrahim, J Brownrigg
Therapeutic advances in chronic disease 4 (5), 242-261, 2013
392013
Mad2 binding is not sufficient for complete Cdc20 sequestering in mitotic transition control (an in silico study)
B Ibrahim, P Dittrich, S Diekmann, E Schmitt
Biophysical chemistry 134 (1-2), 93-100, 2008
342008
A dynamical model of the spindle position checkpoint
AK Caydasi, M Lohel, G Grünert, P Dittrich, G Pereira, B Ibrahim
Molecular systems biology 8 (1), 582, 2012
302012
Towards evolutionary network reconstruction tools for systems biology
T Lenser, T Hinze, B Ibrahim, P Dittrich
European Conference on Evolutionary Computation, Machine Learning and Data …, 2007
272007
Understanding networks of computing chemical droplet neurons based on information flow
G Gruenert, K Gizynski, G Escuela, B Ibrahim, J Gorecki, P Dittrich
International journal of neural systems 25 (07), 1450032, 2015
242015
Rule-based modeling and simulations of the inner kinetochore structure
S Tschernyschkow, S Herda, G Gruenert, V Doering, D Görlich, ...
Progress in biophysics and molecular biology 113 (1), 33-45, 2013
242013
In silico study of kinetochore control, amplification, and inhibition effects in MCC assembly
B Ibrahim, E Schmitt, P Dittrich, S Diekmann
Biosystems 95 (1), 35-50, 2009
242009
Cycles and the qualitative evolution of chemical systems
P Kreyssig, G Escuela, B Reynaert, T Veloz, B Ibrahim, P Dittrich
PloS one 7 (10), e45772, 2012
232012
The role of localization in the operation of the mitotic spindle assembly checkpoint
M Lohel, B Ibrahim, S Diekmann, P Dittrich
Cell Cycle 8 (16), 2650-2660, 2009
212009
Effects of small particle numbers on long-term behaviour in discrete biochemical systems
P Kreyssig, C Wozar, S Peter, T Veloz, B Ibrahim, P Dittrich
Bioinformatics 30 (17), i475-i481, 2014
192014
Multi-scale Modelling of Computers Made from Excitable Chemical Droplets.
G Gruenert, J Szymanski, J Holley, G Escuela, A Diem, B Ibrahim, ...
IJUC 9 (3-4), 237-266, 2013
192013
Stochastic effects in a compartmental model for mitotic checkpoint regulation
B Ibrahim, P Dittrich, S Diekmann, E Schmitt
Journal of Integrative Bioinformatics 4 (3), 77-88, 2007
192007
Toward a systems-level view of mitotic checkpoints
B Ibrahim
Progress in biophysics and molecular biology 117 (2-3), 217-224, 2015
172015
Investigation of selected heavy metals in street and house dust from Al-Qunfudah, Kingdom of Saudi Arabia
MK Harb, M Ebqa’ai, A Al-rashidi, BH Alaziqi, MS Al Rashdi, B Ibrahim
Environmental Earth Sciences 74 (2), 1755-1763, 2015
152015
Spatial rule-based modeling: a method and its application to the human mitotic kinetochore
B Ibrahim, R Henze, G Gruenert, M Egbert, J Huwald, P Dittrich
Cells 2 (3), 506-544, 2013
132013
Active transport can greatly enhance Cdc20: Mad2 formation
B Ibrahim, R Henze
International journal of molecular sciences 15 (10), 19074-19091, 2014
102014
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Articles 1–20