Shaman Narayanasamy
Shaman Narayanasamy
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Year
Colonization and succession within the human gut microbiome by archaea, bacteria, and microeukaryotes during the first year of life
L Wampach, A Heintz-Buschart, A Hogan, EEL Muller, S Narayanasamy, ...
Frontiers in microbiology 8, 738, 2017
1492017
Birth mode is associated with earliest strain-conferred gut microbiome functions and immunostimulatory potential
L Wampach, A Heintz-Buschart, JV Fritz, J Ramiro-Garcia, J Habier, ...
Nature communications 9 (1), 1-14, 2018
1262018
IMP: a pipeline for reproducible reference-independent integrated metagenomic and metatranscriptomic analyses
S Narayanasamy, Y Jarosz, EEL Muller, A Heintz-Buschart, M Herold, ...
Genome biology 17 (1), 1-21, 2016
762016
Transcriptomics and Functional Genomics of ROS-Induced Cell Death Regulation by RADICAL-INDUCED CELL DEATH1
M Brosche, T Blomster, J Salojärvi, F Cui, N Sipari, J Leppälä, ...
PLoS genetics 10 (2), e1004112, 2014
742014
Community-integrated omics links dominance of a microbial generalist to fine-tuned resource usage
EEL Muller, N Pinel, CC Laczny, MR Hoopmann, S Narayanasamy, ...
Nature communications 5 (1), 1-10, 2014
682014
Comparative integrated omics: identification of key functionalities in microbial community-wide metabolic networks
H Roume, A Heintz-Buschart, EEL Muller, P May, VP Satagopam, ...
npj Biofilms and Microbiomes 1 (1), 1-11, 2015
612015
Integrated omics for the identification of key functionalities in biological wastewater treatment microbial communities
S Narayanasamy, EEL Muller, AR Sheik, P Wilmes
Microbial biotechnology 8 (3), 363-368, 2015
392015
Mechanisms of Persistence of the Ammonia-Oxidizing Bacteria Nitrosomonas to the Biocide Free Nitrous Acid
AE Laloo, J Wei, D Wang, S Narayanasamy, I Vanwonterghem, D Waite, ...
Environmental science & technology 52 (9), 5386-5397, 2018
342018
Integrated meta-omic analyses of the gastrointestinal tract microbiome in patients undergoing allogeneic hematopoietic stem cell transplantation
A Kaysen, A Heintz-Buschart, EEL Muller, S Narayanasamy, L Wampach, ...
Translational Research 186, 79-94. e1, 2017
212017
Colonization and succession within the human gut microbiome by archaea, bacteria, and microeukaryotes during the first year of life. Front Microbiol 8: 738
L Wampach, A Heintz-Buschart, A Hogan, EEL Muller, S Narayanasamy, ...
162017
Roles of bacteriophages, plasmids and CRISPR immunity in microbial community dynamics revealed using time-series integrated meta-omics
SM Arbas, S Narayanasamy, M Herold, LA Lebrun, MR Hoopmann, S Li, ...
Nature microbiology 6 (1), 123-135, 2021
112021
Integration of time-series meta-omics data reveals how microbial ecosystems respond to disturbance
M Herold, SM Arbas, S Narayanasamy, AR Sheik, LAK Kleine-Borgmann, ...
Nature communications 11 (1), 1-14, 2020
112020
First draft genome sequence of a strain belonging to the Zoogloea genus and its gene expression in situ
EEL Muller, S Narayanasamy, M Zeimes, CC Laczny, LA Lebrun, ...
Standards in genomic sciences 12 (1), 1-8, 2017
82017
Community-reviewed biological network models for toxicology and drug discovery applications
AA Namasivayam, AF Morales, ÁMF Lacave, A Tallam, B Simovic, ...
Gene regulation and systems biology 10, GRSB. S39076, 2016
82016
Birth mode is associated with earliest strain-conferred gut microbiome functions and immunostimulatory potential. Nat Commun. 2018
L Wampach, A Heintz-Buschart, JV Fritz, J Ramiro-Garcia, J Habier, ...
5
Genomic sequencing capacity, data retention, and personal access to raw data in Europe
S Narayanasamy, V Markina, A Thorogood, A Blazkova, M Shabani, ...
Frontiers in genetics 11, 303, 2020
32020
Challenges, Strategies, and Perspectives for Reference-Independent Longitudinal Multi-Omic Microbiome Studies
S Martínez Arbas, SB Busi, P Queirós, L De Nies, M Herold, P May, ...
Frontiers in Genetics 12, 858, 2021
22021
Critical transitions in microbial communities: mobile genetic elements as drivers of the microbial community dynamics within activated sludge of wastewater treatment
S Martinez Arbas, S Narayanasamy, M Herold, L Lebrun, ND Hicks, ...
2018
Development of an integrated omics in silico workflow and its application for studying bacteria-phage interactions in a model microbial community
S Narayanasamy
University of Luxembourg, Belvaux, Luxembourg, 2017
2017
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Articles 1–19