Josep Ll. Gelpí
Josep Ll. Gelpí
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Whole-genome sequencing identifies recurrent mutations in chronic lymphocytic leukaemia
XS Puente, M Pinyol, V Quesada, L Conde, GR Ordóñez, N Villamor, ...
Nature 475 (7354), 101-105, 2011
Exome sequencing identifies recurrent mutations of the splicing factor SF3B1 gene in chronic lymphocytic leukemia
V Quesada, L Conde, N Villamor, GR Ordóñez, P Jares, L Bassaganyas, ...
Nature genetics 44 (1), 47-52, 2012
Non-coding recurrent mutations in chronic lymphocytic leukaemia
XS Puente, S Beà, R Valdés-Mas, N Villamor, J Gutiérrez-Abril, ...
Nature 526 (7574), 519-524, 2015
PMUT: a web-based tool for the annotation of pathological mutations on proteins
C Ferrer-Costa, JL Gelpí, L Zamakola, I Parraga, X De La Cruz, M Orozco
Bioinformatics 21 (14), 3176-3178, 2005
Epigenomic analysis detects widespread gene-body DNA hypomethylation in chronic lymphocytic leukemia
M Kulis, S Heath, M Bibikova, AC Queirós, A Navarro, G Clot, ...
Nature genetics 44 (11), 1236-1242, 2012
Parmbsc1: a refined force field for DNA simulations
I Ivani, PD Dans, A Noy, A Pérez, I Faustino, A Hospital, J Walther, ...
Nature methods 13 (1), 55, 2016
A consensus view of protein dynamics
M Rueda, C Ferrer-Costa, T Meyer, A Pérez, J Camps, JL Gelpí, M Orozco
Proceedings of the National Academy of Sciences 104 (3), 796, 2007
Obligatory Amino Acid Exchange via Systems bo,+-like and y+ L-like
J Chillarón, R Estévez, C Mora, CA Wagner, H Suessbrich, F Lang, ...
Journal of Biological Chemistry 271 (30), 17761, 1996
Pan-cancer analysis of whole genomes
I The, TPCA of Whole, Genomes Consortium
Nature 578 (7793), 82, 2020
Molecular dynamics simulations: advances and applications
A Hospital, JR Goñi, M Orozco, JL Gelpí
Advances and applications in bioinformatics and chemistry: AABC 8, 37, 2015
Glutaryl-CoA dehydrogenase deficiency in Spain: evidence of two groups of patients, genetically, and biochemically distinct
Pediatric research 48 (3), 315, 2000
SAR and 3D-QSAR studies on thiadiazolidinone derivatives: exploration of structural requirements for glycogen synthase kinase 3 inhibitors
A Martinez, M Alonso, A Castro, I Dorronsoro, JL Gelpí, FJ Luque, C Pérez, ...
Journal of medicinal chemistry 48 (23), 7103-7112, 2005
Theoretical study of the truncated hemoglobin HbN: exploring the molecular basis of the NO detoxification mechanism
A Crespo, MA Martí, SG Kalko, A Morreale, M Orozco, JL Gelpi, FJ Luque, ...
Journal of the American Chemical Society 127 (12), 4433-4444, 2005
Interoperability with Moby 1.0-it's better than sharing your toothbrush!
M Wilkinson
Nature Precedings, 1-1, 2008
MoDEL (Molecular Dynamics Extended Library). A database of atomistic molecular dynamics simulations
T Meyer, M D'Abramo, A , Hospital, M Rueda, C Ferrer-Costa, A Pérez, ...
Structure 18 (11), 1399-1409, 2010
Classical molecular interaction potentials: improved setup procedure in molecular dynamics simulations of proteins
JL Gelpí, SG Kalko, X Barril, J Cirera, X de la Cruz, FJ Luque, M Orozco
Proteins: Structure, Function, and Bioinformatics 45 (4), 428-437, 2001
Continuum solvation models: Dissecting the free energy of solvation
FJ Luque, C Curutchet, J Munoz-Muriedas, A Bidon-Chanal, I Soteras, ...
Phys. Chem. Chem. Phys. 5 (18), 2003
FlexServ: an integrated tool for the analysis of protein flexibility
J Camps, O Carrillo, A Emperador, L Orellana, M Rueda, D Cicin-Sain, ...
Bioinformatics 25 (13), 1709, 2009
Comprehensive characterization of complex structural variations in cancer by directly comparing genome sequence reads
V Moncunill, S Gonzalez, S Beà, LO Andrieux, I Salaverria, C Royo, ...
Nature biotechnology 32 (11), 1106-1112, 2014
MDWeb and MDMoby: an integrated web-based platform for molecular dynamics simulations
A Hospital, P Andrio, C Fenollosa, D Cicin-Sain, M Orozco, JL Gelpí
Bioinformatics 28 (9), 1278-1279, 2012
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