| Modeling translation in protein synthesis with TASEP: A tutorial and recent developments RKP Zia, JJ Dong, B Schmittmann Journal of Statistical Physics 144 (2), 405-428, 2011 | 211 | 2011 |
| Inhomogeneous exclusion processes with extended objects: The effect of defect locations JJ Dong, B Schmittmann, RKP Zia Physical Review E 76 (5), 051113, 2007 | 105 | 2007 |
| Towards a model for protein production rates JJ Dong, B Schmittmann, RKP Zia Journal of Statistical Physics 128 (1), 21-34, 2007 | 88 | 2007 |
| Probing the Mechanical Properties of Magnetosome chains in Living Magnetotactic Bacteria DF A. Körnig, J.J. Dong, M. Bennet, M. Widdrat, J. Andert, F. D. Müller, D ... Nano Letters 14 (8), 4653–4659, 2014 | 48 | 2014 |
| On Ribosome Load, Codon Bias and Protein Abundance S Klumpp, J Dong, T Hwa Public Library of Science ONE, 2012 | 45 | 2012 |
| Entrainment and unit velocity: Surprises in an accelerated exclusion process J Dong, S Klumpp, RKP Zia Phys Rev Lett 109, 130602, 2012 | 25 | 2012 |
| Dynamic metabolic exchanges between complementary bacterial types provide collaborative stress resistance K Amarnath, AV Narla, S Pontrelli, J Dong, T Caglar, BR Taylor, ... bioRxiv, 2021 | 17* | 2021 |
| Dynamic blockage in an exclusion process M Sahoo, J Dong, S Klumpp Journal of Physics A: Mathematical and Theoretical 48 (1), 015007, 2014 | 17 | 2014 |
| Simulation of colony pattern formation under differential adhesion and cell proliferation JJ Dong, S Klumpp Soft Matter, 2018 | 16 | 2018 |
| Interplay between finite resources and a local defect in an asymmetric simple exclusion process LJ Cook, JJ Dong, A LaFleur Phys. Rev. E 88 (042127), 2013 | 14 | 2013 |
| Understanding the edge effect in TASEP with mean-field theoretic approaches JJ Dong, RKP Zia, B Schmittmann Journal of Physics A: Mathematical and Theoretical 42 (1), 015002, 2008 | 13 | 2008 |
| Stress-induced metabolic exchanges between complementary bacterial types underly a dynamic mechanism of inter-species stress resistance K Amarnath, AV Narla, S Pontrelli, J Dong, J Reddan, BR Taylor, T Caglar, ... Nature communications 14 (1), 3165, 2023 | 10 | 2023 |
| Shorter Exposures to Harder X-Rays Trigger Early Apoptotic Events in Xenopus laevis Embryos JJ Dong, SP Mury, KE Drahos, M Moscovitch, RKP Zia, CV Finkielstein Plos one 5 (1), e8970, 2010 | 6 | 2010 |
| Mass transport perspective on an accelerated exclusion process: Analysis of augmented current and unit-velocity phases J Dong, S Klumpp, RKP Zia Physical Review E 87 (2), 022146, 2013 | 5 | 2013 |
| Inhomogeneous Totally Asymmetric Simple Exclusion Processes: Simulations, Theory and Application to Protein Synthesis J Dong Virginia Polytechnic Institute and State, 2008 | 3 | 2008 |
| Emergence of sector and spiral patterns from a two-species mutualistic cross-feeding model J Lin, H Sun, JJ Dong PLOS One 17 (10), 0276268, 2022 | 2 | 2022 |
| Population Dynamics Model and Analysis for Bacteria Transformation and Conjugation JJ Dong, JD Russo, K Sampson Journal of Physics Communications 4 (9), 095021, 2020 | 2 | 2020 |
| Spatiotemporal development of growth and death zones in expanding bacterial colonies driven by emergent nutrient dynamics H Kannan, P Sun, T Çağlar, P Yao, BR Taylor, K Sahu, D Ge, M Mori, ... bioRxiv, 2023.08. 27.554977, 2023 | 1 | 2023 |
| Estimating currents in totally asymmetric simple exclusion process with extended particles and inhomogeneous hopping rates. RKP Zia, J Dong, B Schmittmann Bulletin of the American Physical Society 54, 2009 | 1 | 2009 |
| Spatiotemporal dynamics of metabolite gradients control the emergent morphology of a bacterial colony on hard agar H Kannan, P Sun, T Caglar, D Ge, K Sahu, J Dong, B Li, T Hwa APS March Meeting Abstracts 2023, Z10. 004, 2023 | | 2023 |
Stefan KlumppInstitut für Dynamik komplexer Systeme, Georg-August-Universität GöttingenVerified email at phys.uni-goettingen.de
