Dynamic properties of the Sulfolobus CRISPR/Cas and CRISPR/Cmr systems when challenged with vector‐borne viral and plasmid genes and protospacers S Gudbergsdottir, L Deng, Z Chen, JVK Jensen, LR Jensen, Q She, ...
Molecular microbiology 79 (1), 35-49, 2011
329 2011 A novel interference mechanism by a type IIIB CRISPR‐Cmr module in Sulfolobus L Deng, RA Garrett, SA Shah, X Peng, Q She
Molecular microbiology 87 (5), 1088-1099, 2013
283 2013 Unmarked gene deletion and host–vector system for the hyperthermophilic crenarchaeon Sulfolobus islandicus L Deng, H Zhu, Z Chen, YX Liang, Q She
Extremophiles 13, 735-746, 2009
186 2009 A synthetic arabinose-inducible promoter confers high levels of recombinant protein expression in hyperthermophilic archaeon Sulfolobus islandicus N Peng, L Deng, Y Mei, D Jiang, Y Hu, M Awayez, Y Liang, Q She
Applied and environmental microbiology 78 (16), 5630-5637, 2012
92 2012 A type III-B CRISPR-Cas effector complex mediating massive target DNA destruction W Han, Y Li, L Deng, M Feng, W Peng, S Hallstrøm, J Zhang, N Peng, ...
Nucleic acids research 45 (4), 1983-1993, 2017
87 2017 Modulation of CRISPR locus transcription by the repeat-binding protein Cbp1 in Sulfolobus L Deng, CS Kenchappa, X Peng, Q She, RA Garrett
Nucleic acids research 40 (6), 2470-2480, 2012
77 2012 Fecal filtrate transplantation protects against necrotizing enterocolitis A Brunse, L Deng, X Pan, Y Hui, JL Castro-Mejía, W Kot, DN Nguyen, ...
The ISME journal 16 (3), 686-694, 2022
72 2022 Bacteriophage-mediated manipulation of the gut microbiome–promises and presents limitations TS Rasmussen, AK Koefoed, RR Jakobsen, L Deng, JL Castro-Mejía, ...
FEMS Microbiology Reviews 44 (4), 507-521, 2020
71 2020 Virulent coliphages in 1-year-old children fecal samples are fewer, but more infectious than temperate coliphages A Mathieu, M Dion, L Deng, D Tremblay, E Moncaut, SA Shah, J Stokholm, ...
Nature Communications 11 (1), 378, 2020
65 2020 Revealing the essentiality of multiple archaeal pcna genes using a mutant propagation assay based on an improved knockout method C Zhang, L Guo, L Deng, Y Wu, Y Liang, L Huang, Q She
Microbiology 156 (11), 3386-3397, 2010
65 2010 CRISPR-based immune systems of the Sulfolobales: complexity and diversity RA Garrett, SA Shah, G Vestergaard, L Deng, S Gudbergsdottir, ...
Biochemical Society Transactions 39 (1), 51-57, 2011
64 2011 Genetic analyses in the hyperthermophilic archaeon Sulfolobus islandicus Q She, C Zhang, L Deng, N Peng, Z Chen, YX Liang
Biochemical Society Transactions 37 (1), 92-96, 2009
63 2009 High-Level Expression of an Aspergillus niger Endo- S Zhao, J Huang, C Zhang, L Deng, N Hu, Y Liang
Journal of microbiology and biotechnology 20 (3), 467-473, 2010
59 2010 CRISPR-Cas adaptive immune systems of the Sulfolobales: unravelling their complexity and diversity RA Garrett, SA Shah, S Erdmann, G Liu, M Mousaei, C León-Sobrino, ...
Life 5 (1), 783-817, 2015
56 2015 Genome binning of viral entities from bulk metagenomics data J Johansen, DR Plichta, JN Nissen, ML Jespersen, SA Shah, L Deng, ...
Nature communications 13 (1), 965, 2022
53 2022 Novel insights into gene regulation of the rudivirus SIRV2 infecting Sulfolobus cells E Okutan, L Deng, S Mirlashari, K Uldahl, M Halim, C Liu, RA Garrett, ...
RNA biology 10 (5), 875-885, 2013
44 2013 A protocol for extraction of infective viromes suitable for metagenomics sequencing from low volume fecal samples L Deng, R Silins, JL Castro-Mejía, W Kot, L Jessen, J Thorsen, S Shah, ...
Viruses 11 (7), 667, 2019
43 2019 A novel single-tailed fusiform Sulfolobus virus STSV2 infecting model Sulfolobus species S Erdmann, B Chen, X Huang, L Deng, C Liu, SA Shah, ...
Extremophiles 18, 51-60, 2014
42 2014 Expanding known viral diversity in the healthy infant gut SA Shah, L Deng, J Thorsen, AG Pedersen, MB Dion, JL Castro-Mejía, ...
Nature microbiology 8 (5), 986-998, 2023
39 2023 Characterization of the vaginal DNA virome in health and dysbiosis RR Jakobsen, T Haahr, P Humaidan, JS Jensen, WP Kot, JL Castro-Mejia, ...
Viruses 12 (10), 1143, 2020
37 2020 