| The STRING database in 2021: customizable protein–protein networks, and functional characterization of user-uploaded gene/measurement sets D Szklarczyk, AL Gable, KC Nastou, D Lyon, R Kirsch, S Pyysalo, ... Nucleic acids research 49 (D1), D605-D612, 2021 | 5127 | 2021 |
| The STRING database in 2023: protein–protein association networks and functional enrichment analyses for any sequenced genome of interest D Szklarczyk, R Kirsch, M Koutrouli, K Nastou, F Mehryary, R Hachilif, ... Nucleic acids research 51 (D1), D638-D646, 2023 | 1064 | 2023 |
| Linear B-cell epitope prediction for in silico vaccine design: A performance review of methods available via command-line interface KA Galanis, KC Nastou, NC Papandreou, GN Petichakis, DG Pigis, ... International journal of molecular sciences 22 (6), 3210, 2021 | 88* | 2021 |
| The amyloid interactome: exploring protein aggregation KV Biza, KC Nastou, PL Tsiolaki, CV Mastrokalou, SJ Hamodrakas, ... PloS one 12 (3), e0173163, 2017 | 37 | 2017 |
| Cytoscape stringApp 2.0: analysis and visualization of heterogeneous biological networks NT Doncheva, JH Morris, H Holze, R Kirsch, KC Nastou, Y Cuesta-Astroz, ... Journal of proteome research 22 (2), 637-646, 2022 | 33 | 2022 |
| MBPpred: Proteome-wide detection of membrane lipid-binding proteins using profile Hidden Markov Models KC Nastou, GN Tsaousis, NC Papandreou, SJ Hamodrakas Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics 1864 (7), 747-754, 2016 | 21 | 2016 |
| The human plasma membrane peripherome: visualization and analysis of interactions KC Nastou, GN Tsaousis, KE Kremizas, ZI Litou, SJ Hamodrakas BioMed research international 2014, 2014 | 20 | 2014 |
| Exploring the conservation of Alzheimer-related pathways between H. sapiens and C. elegans: a network alignment approach AE Apostolakou, XK Sula, KC Nastou, GI Nasi, VA Iconomidou Scientific reports 11 (1), 4572, 2021 | 14 | 2021 |
| AmyCo: the amyloidoses collection KC Nastou, GI Nasi, PL Tsiolaki, ZI Litou, VA Iconomidou Amyloid 26 (3), 112-117, 2019 | 13 | 2019 |
| PerMemDB: A database for eukaryotic peripheral membrane proteins KC Nastou, GN Tsaousis, VA Iconomidou Biochimica et Biophysica Acta (BBA)-Biomembranes 1862 (2), 183076, 2020 | 12 | 2020 |
| Mining databases for protein aggregation: a review PL Tsiolaki, KC Nastou, SJ Hamodrakas, VA Iconomidou Amyloid 24 (3), 143-152, 2017 | 12 | 2017 |
| FAVA: High-quality functional association networks inferred from scRNA-seq and proteomics data M Koutrouli, K Nastou, P Piera Líndez, R Bouwmeester, S Rasmussen, ... Bioinformatics 40 (2), btae010, 2024 | 5 | 2024 |
| Analysis of single-nucleotide polymorphisms in human voltage-gated ion channels KC Nastou, MA Batskinis, ZI Litou, SJ Hamodrakas, VA Iconomidou Journal of proteome research 18 (5), 2310-2320, 2019 | 4 | 2019 |
| S1000: a better taxonomic name corpus for biomedical information extraction J Luoma, K Nastou, T Ohta, H Toivonen, E Pafilis, LJ Jensen, S Pyysalo Bioinformatics 39 (6), btad369, 2023 | 2 | 2023 |
| Exploring amyloidogenicity of clusterin: a structural and bioinformatics analysis PL Tsiolaki, KC Nastou, NN Louros, SJ Hamodrakas, VA Iconomidou GeNeDis 2016: Geriatrics, 93-107, 2017 | 2 | 2017 |
| STRING-ing together protein complexes: extracting physical protein interactions from the literature F Mehryary, K Nastou, T Ohta, LJ Jensen, S Pyysalo bioRxiv, 2023.12. 10.570999, 2023 | 1 | 2023 |
| LiGIoNs: A computational method for the detection and classification of ligand-gated ion channels AE Apostolakou, KC Nastou, GN Petichakis, ZI Litou, VA Iconomidou Biochimica et Biophysica Acta (BBA)-Biomembranes 1864 (9), 183956, 2022 | 1 | 2022 |
| Visualization and analysis of the interaction network of proteins associated with blood-cell targeting autoimmune diseases AI Amanatidou, KC Nastou, OE Tsitsilonis, VA Iconomidou Biochimica et Biophysica Acta (BBA)-Molecular Basis of Disease 1866 (5), 165714, 2020 | 1 | 2020 |
| The amyloid interactome 2: mapping protein aggregation KC Nastou, PL Tsiolaki, VA Iconomidou Amyloid 26 (sup1), 142-143, 2019 | 1 | 2019 |
| Improving dictionary-based named entity recognition with deep learning K Nastou, M Koutrouli, S Pyysalo, LJ Jensen bioRxiv, 2023.12. 10.570777, 2023 | | 2023 |
Lars Juhl JensenUniversity of CopenhagenVerified email at cpr.ku.dk
