Matthew D Edwards
Matthew D Edwards
Verily Life Sciences
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Cited by
Cited by
An integrated semiconductor device enabling non-optical genome sequencing
JM Rothberg, W Hinz, TM Rearick, J Schultz, W Mileski, M Davey, ...
Nature 475 (7356), 348-352, 2011
Convolutional neural network architectures for predicting DNA–protein binding
H Zeng, MD Edwards, G Liu, DK Gifford
Bioinformatics 32 (12), i121-i127, 2016
High-throughput mapping of regulatory DNA
N Rajagopal, S Srinivasan, K Kooshesh, Y Guo, MD Edwards, B Banerjee, ...
Nature biotechnology 34 (2), 167-174, 2016
Determination of RNA structural diversity and its role in HIV-1 RNA splicing
PJ Tomezsko, VDA Corbin, P Gupta, H Swaminathan, M Glasgow, ...
Nature 582 (7812), 438-442, 2020
An integrated model of multiple-condition ChIP-Seq data reveals predeterminants of Cdx2 binding
S Mahony, MD Edwards, EO Mazzoni, RI Sherwood, A Kakumanu, ...
PLoS computational biology 10 (3), e1003501, 2014
High-resolution genetic mapping with pooled sequencing
MD Edwards, DK Gifford
BMC bioinformatics 13, 1-11, 2012
Predicting gene expression in massively parallel reporter assays: A comparative study
A Kreimer, H Zeng, MD Edwards, Y Guo, K Tian, S Shin, R Welch, ...
Human mutation 38 (9), 1240-1250, 2017
Working toward precision medicine: Predicting phenotypes from exomes in the Critical Assessment of Genome Interpretation (CAGI) challenges
R Daneshjou, Y Wang, Y Bromberg, S Bovo, PL Martelli, G Babbi, ...
Human mutation 38 (9), 1182-1192, 2017
Interactions between chromosomal and nonchromosomal elements reveal missing heritability
MD Edwards, A Symbor-Nagrabska, L Dollard, DK Gifford, GR Fink
Proceedings of the National Academy of Sciences 111 (21), 7719-7722, 2014
Toward a mobile platform for real-world digital measurement of depression: user-centered design, data quality, and behavioral and clinical modeling
S Nickels, MD Edwards, SF Poole, D Winter, J Gronsbell, B Rozenkrants, ...
JMIR mental health 8 (8), e27589, 2021
Perspectives on ENCODE
F Abascal, R Acosta, NJ Addleman, J Adrian, V Afzal, B Aken, JA Akiyama
Nature 583 (7818), 693-699, 2020
Universal count correction for high-throughput sequencing
TB Hashimoto, MD Edwards, DK Gifford
PLoS computational biology 10 (3), e1003494, 2014
A holistic approach for suppression of COVID-19 spread in workplaces and universities
SF Poole, J Gronsbell, D Winter, S Nickels, R Levy, B Fu, M Burq, S Saeb, ...
PloS one 16 (8), e0254798, 2021
Accurate eQTL prioritization with an ensemble‐based framework
H Zeng, MD Edwards, Y Guo, DK Gifford
Human Mutation 38 (9), 1259-1265, 2017
Author Correction: Expanded encyclopaedias of DNA elements in the human and mouse genomes
JE Moore, MJ Purcaro, HE Pratt, CB Epstein, N Shoresh, J Adrian, T Kawli, ...
Nature 605 (7909), E3-E3, 2022
Boarding at the Speed of Flight
M Bauer, K Bhawalkar, M Edwards
UMAP Journal 237, 2007
Author Correction: Perspectives on ENCODE (Nature,(2020), 583, 7818,(693-698), 10.1038/s41586-020-2449-8)
FBC Abascal, R Acosta, NJ Addleman, J Adrian, V Afzal, B Aken, R Ai, ...
Springer Nature, 2022
Perspectives on ENCODE
NJ Addleman, J Adrian, UK Baymuradov, A Bhaskar, N Boley, L Cao, ...
Nature 583 (7818), 693-698, 2020
Information-sharing models for computational genetics
MD Edwards
Massachusetts Institute of Technology, 2016
Computational methods for high-throughput pooled genetic experiments
MD Edwards
Massachusetts Institute of Technology, 2011
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