| Analytical kinetic model of native tandem promoters in E. coli V Chauhan, MNM Bahrudeen, CSD Palma, ISC Baptista, BLB Almeida, ... PLoS Computational Biology 18 (1), e1009824, 2022 | 8 | 2022 |
| Sequence-dependent model of genes with dual σ factor preference ISC Baptista, V Kandavalli, V Chauhan, MNM Bahrudeen, BLB Almeida, ... Biochimica et Biophysica Acta (BBA)-Gene Regulatory Mechanisms 1865 (3), 194812, 2022 | 6* | 2022 |
| Alteration of DNA supercoiling serves as a trigger of short-term cold shock repressed genes of E. coli S Dash, CSD Palma, ISC Baptista, BLB Almeida, MNM Bahrudeen, ... Nucleic Acids Research 50 (15), 8512-8528, 2022 | 3 | 2022 |
| The transcription factor network of E. coli steers global responses to shifts in RNAP concentration B LB Almeida, MN M. Bahrudeen, V Chauhan, S Dash, V Kandavalli, ... Nucleic Acids Research 50 (12), 6801-6819, 2022 | 1 | 2022 |
| Positive supercoiling buildup is a trigger of E. coli’s short-term response to cold shock S Dash, CSD Palma, ISC Baptista, MNM Bahrudeen, BLB Almeida, ... bioRxiv, 2021.12. 22.473827, 2021 | 1 | 2021 |
| Efficiency and Robustness of Processes Driven by Nucleoid Exclusion in Escherichia coli I Baptista, V Chauhan, B Almeida, V Kandavalli, AS Ribeiro Physical Microbiology, 59-80, 2020 | 1 | 2020 |
| Transcription Factor Network Regulates E. coli’s Genome-wide Stress-response BL de Brito Almeida | | 2024 |
| Promoters proximity as a regulatory mechanism in single cell protein numbers statistics V Chauhan, MM Bahrudeen, BL de Brito Almeida, AS Ribeiro EMBL Conference: From Functional Genomics to Systems Biology, 2020 | | 2020 |
| Regulatory mechanisms of the dynamics of closely spaced promoters in E. coli CSD Palma, MNM Bahrudeen, V Chauhan, I Baptista, S Dash, B Almeida, ... The 1st International BioDesign Research Conference, 2020 | | 2020 |
| Genome-wide responses of Escherichia coli to changing RNA polymerase concentrations BL de Brito Almeida, IC Baptista, CSD Palma, V Kandavalli, ... Congress of microbiology and biotechnology 2019 (Microbiotec’19), 2019 | | 2019 |
| Efficiency and Robustness to Nonoptimal Temperatures of Nucleoid Exclusion Processes in Escherichia coli IC Baptista, BL de Brito Almeida, AS Ribeiro EMBO| EMBL Symposium: New Approaches and Concepts in Microbiology, 2019 | | 2019 |
| Asymmetries in gene expression dynamics as a potential enhancer of microbial resilience BL de Brito Almeida, S Oliveira, AS Ribeiro 15th Symposium on Bacterial Genetics and Ecology (BAGECO)–Ecosystem drivers …, 2019 | | 2019 |
| Mean and Variability in RNA Polymerase Numbers Are Correlated to the Mean but Not the Variability in Size and Composition of Escherichia Coli Cells. B Almeida, V Chauhan, V Kandavalli, AS Ribeiro BIOINFORMATICS, 226-233, 2019 | | 2019 |
| Studying Z-ring formation following nucleoid partitioning in Escherichia coli by microscopy, flow-cytometry and machine learning BL de Brito Almeida, V Chauhan, AS Ribeiro Global Summit on Artificial Intelligence and Neural Networks, 2018 | | 2018 |
| Analysis of the time intervals between nucleoid partitioning, Z-ring formation and morphological cell division in Escherichia coli BL de Brito Almeida, AS Ribeiro | | 2018 |
| Processamento de Imagem de Microscópio para Análise de Biópsia BL de Brito Almeida Faculdade de Ciências e Tecnologias, Universidade Nova de Lisboa, 2017 | | 2017 |
Vatsala ChauhanTampere UniversityVerified email at tuni.fi
