Anne E. Carpenter
Anne E. Carpenter
Imaging Platform Director, Broad Institute of Harvard and MIT
Verified email at broadinstitute.org - Homepage
TitleCited byYear
CellProfiler: image analysis software for identifying and quantifying cell phenotypes
AE Carpenter, TR Jones, MR Lamprecht, C Clarke, IH Kang, O Friman, ...
Genome biology 7 (10), R100, 2006
25912006
A lentiviral RNAi library for human and mouse genes applied to an arrayed viral high-content screen
J Moffat, DA Grueneberg, X Yang, SY Kim, AM Kloepfer, G Hinkle, ...
Cell 124 (6), 1283-1298, 2006
14012006
mTOR complex 1 regulates lipin 1 localization to control the SREBP pathway
TR Peterson, SS Sengupta, TE Harris, AE Carmack, SA Kang, E Balderas, ...
Cell 146 (3), 408-420, 2011
6262011
CellProfiler™: free, versatile software for automated biological image analysis
MR Lamprecht, DM Sabatini, AE Carpenter
Biotechniques 42 (1), 71-75, 2007
5612007
Improved structure, function and compatibility for CellProfiler: modular high-throughput image analysis software
L Kamentsky, TR Jones, A Fraser, MA Bray, DJ Logan, KL Madden, ...
Bioinformatics 27 (8), 1179-1180, 2011
5422011
Long-range directional movement of an interphase chromosome site
CH Chuang, AE Carpenter, B Fuchsova, T Johnson, P de Lanerolle, ...
Current Biology 16 (8), 825-831, 2006
4672006
In germ cells of mouse embryonic ovaries, the decision to enter meiosis precedes premeiotic DNA replication
AE Baltus, DB Menke, YC Hu, ML Goodheart, AE Carpenter, DG de Rooij, ...
Nature genetics 38 (12), 1430, 2006
3912006
Biological imaging software tools
KW Eliceiri, MR Berthold, IG Goldberg, L Ibáñez, BS Manjunath, ...
Nature methods 9 (7), 697, 2012
3572012
Systematic genome-wide screens of gene function
AE Carpenter, DM Sabatini
Nature Reviews Genetics 5 (1), 11, 2004
3472004
Scoring diverse cellular morphologies in image-based screens with iterative feedback and machine learning
TR Jones, AE Carpenter, MR Lamprecht, J Moffat, SJ Silver, JK Grenier, ...
Proceedings of the National Academy of Sciences 106 (6), 1826-1831, 2009
2902009
CellProfiler Analyst: data exploration and analysis software for complex image-based screens
T Jones, I Kang, D Wheeler, R Lindquist, A Papallo, D Sabatini, P Golland, ...
BMC bioinformatics 9 (1), 482, 2008
2902008
An algorithm-based topographical biomaterials library to instruct cell fate
HV Unadkat, M Hulsman, K Cornelissen, BJ Papenburg, ...
Proceedings of the National Academy of Sciences 108 (40), 16565-16570, 2011
2642011
Visualization of image data from cells to organisms
T Walter, DW Shattuck, R Baldock, ME Bastin, AE Carpenter, S Duce, ...
Nature methods 7 (3s), S26, 2010
2402010
Cell microarrays and RNA interference chip away at gene function
DB Wheeler, AE Carpenter, DM Sabatini
Nature genetics 37 (6s), S25, 2005
2152005
The Spemann organizer gene, Goosecoid, promotes tumor metastasis
KA Hartwell, B Muir, F Reinhardt, AE Carpenter, DC Sgroi, RA Weinberg
Proceedings of the National Academy of Sciences 103 (50), 18969-18974, 2006
2082006
BRCA1-induced large-scale chromatin unfolding and allele-specific effects of cancer-predisposing mutations
Q Ye, YF Hu, H Zhong, AC Nye, AS Belmont, R Li
J Cell Biol 155 (6), 911-922, 2001
2022001
High-throughput screen for novel antimicrobials using a whole animal infection model
TI Moy, AL Conery, J Larkins-Ford, G Wu, R Mazitschek, G Casadei, ...
ACS chemical biology 4 (7), 527-533, 2009
1792009
Identification of small molecules for human hepatocyte expansion and iPS differentiation
J Shan, RE Schwartz, NT Ross, DJ Logan, D Thomas, SA Duncan, ...
Nature chemical biology 9 (8), 514-520, 2013
1762013
Ligand-mediated assembly and real-time cellular dynamics of estrogen receptor α-coactivator complexes in living cells
DL Stenoien, AC Nye, MG Mancini, K Patel, M Dutertre, BW O'Malley, ...
Molecular and cellular biology 21 (13), 4404-4412, 2001
1692001
Human tumors instigate granulin-expressing hematopoietic cells that promote malignancy by activating stromal fibroblasts in mice
M Elkabets, AM Gifford, C Scheel, B Nilsson, F Reinhardt, MA Bray, ...
The Journal of clinical investigation 121 (2), 784-799, 2011
1682011
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