Anne E. Carpenter
Anne E. Carpenter
Institute Scientist and Imaging Platform Director, Broad Institute of Harvard and MIT
Verified email at broadinstitute.org - Homepage
Title
Cited by
Cited by
Year
CellProfiler: image analysis software for identifying and quantifying cell phenotypes
AE Carpenter, TR Jones, MR Lamprecht, C Clarke, IH Kang, O Friman, ...
Genome biology 7 (10), R100, 2006
33872006
A lentiviral RNAi library for human and mouse genes applied to an arrayed viral high-content screen
J Moffat, DA Grueneberg, X Yang, SY Kim, AM Kloepfer, G Hinkle, ...
Cell 124 (6), 1283-1298, 2006
15482006
mTOR complex 1 regulates lipin 1 localization to control the SREBP pathway
TR Peterson, SS Sengupta, TE Harris, AE Carmack, SA Kang, E Balderas, ...
Cell 146 (3), 408-420, 2011
7832011
Improved structure, function and compatibility for CellProfiler: modular high-throughput image analysis software
L Kamentsky, TR Jones, A Fraser, MA Bray, DJ Logan, KL Madden, ...
Bioinformatics 27 (8), 1179-1180, 2011
7252011
CellProfiler™: free, versatile software for automated biological image analysis
MR Lamprecht, DM Sabatini, AE Carpenter
Biotechniques 42 (1), 71-75, 2007
6742007
Long-range directional movement of an interphase chromosome site
CH Chuang, AE Carpenter, B Fuchsova, T Johnson, P de Lanerolle, ...
Current Biology 16 (8), 825-831, 2006
5022006
Biological imaging software tools
KW Eliceiri, MR Berthold, IG Goldberg, L Ibáñez, BS Manjunath, ...
Nature methods 9 (7), 697, 2012
4462012
Opportunities and obstacles for deep learning in biology and medicine
T Ching, DS Himmelstein, BK Beaulieu-Jones, AA Kalinin, BT Do, ...
Journal of The Royal Society Interface 15 (141), 20170387, 2018
4302018
In germ cells of mouse embryonic ovaries, the decision to enter meiosis precedes premeiotic DNA replication
AE Baltus, DB Menke, YC Hu, ML Goodheart, AE Carpenter, DG de Rooij, ...
Nature genetics 38 (12), 1430-1434, 2006
4252006
CellProfiler Analyst: data exploration and analysis software for complex image-based screens
T Jones, I Kang, D Wheeler, R Lindquist, A Papallo, D Sabatini, P Golland, ...
BMC bioinformatics 9 (1), 482, 2008
3732008
Systematic genome-wide screens of gene function
AE Carpenter, DM Sabatini
Nature Reviews Genetics 5 (1), 11-22, 2004
3622004
Scoring diverse cellular morphologies in image-based screens with iterative feedback and machine learning
TR Jones, AE Carpenter, MR Lamprecht, J Moffat, SJ Silver, JK Grenier, ...
Proceedings of the National Academy of Sciences 106 (6), 1826-1831, 2009
3412009
An algorithm-based topographical biomaterials library to instruct cell fate
HV Unadkat, M Hulsman, K Cornelissen, BJ Papenburg, ...
Proceedings of the National Academy of Sciences 108 (40), 16565-16570, 2011
2902011
Visualization of image data from cells to organisms
T Walter, DW Shattuck, R Baldock, ME Bastin, AE Carpenter, S Duce, ...
Nature methods 7 (3), S26-S41, 2010
2562010
The Spemann organizer gene, Goosecoid, promotes tumor metastasis
KA Hartwell, B Muir, F Reinhardt, AE Carpenter, DC Sgroi, RA Weinberg
Proceedings of the National Academy of Sciences 103 (50), 18969-18974, 2006
2222006
Identification of small molecules for human hepatocyte expansion and iPS differentiation
J Shan, RE Schwartz, NT Ross, DJ Logan, D Thomas, SA Duncan, ...
Nature chemical biology 9 (8), 514, 2013
2192013
BRCA1-induced large-scale chromatin unfolding and allele-specific effects of cancer-predisposing mutations
Q Ye, YF Hu, H Zhong, AC Nye, AS Belmont, R Li
The Journal of cell biology 155 (6), 911-922, 2001
2162001
Cell microarrays and RNA interference chip away at gene function
DB Wheeler, AE Carpenter, DM Sabatini
Nature genetics 37 (6), S25-S30, 2005
2122005
High-throughput screen for novel antimicrobials using a whole animal infection model
TI Moy, AL Conery, J Larkins-Ford, G Wu, R Mazitschek, G Casadei, ...
ACS chemical biology 4 (7), 527-533, 2009
1982009
The bromodomain protein Brd4 insulates chromatin from DNA damage signalling
SR Floyd, ME Pacold, Q Huang, SM Clarke, FC Lam, IG Cannell, ...
Nature 498 (7453), 246-250, 2013
1972013
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