Adrien Coulet
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Using text to build semantic networks for pharmacogenomics
A Coulet, NH Shah, Y Garten, M Musen, RB Altman
Journal of biomedical informatics 43 (6), 1009-1019, 2010
NCBO Resource Index: Ontology-based search and mining of biomedical resources
C Jonquet, P LePendu, S Falconer, A Coulet, NF Noy, MA Musen, ...
Journal of Web Semantics 9 (3), 316-324, 2011
Recent progress in automatically extracting information from the pharmacogenomic literature
Y Garten, A Coulet, RB Altman
Pharmacogenomics 11 (10), 1467-1489, 2010
Creating fair models of atherosclerotic cardiovascular disease risk
S Pfohl, B Marafino, A Coulet, F Rodriguez, L Palaniappan, NH Shah
Proceedings of the 2019 AAAI/ACM Conference on AI, Ethics, and Society, 271-278, 2019
Atherosclerotic cardiovascular disease risk prediction in disaggregated Asian and Hispanic subgroups using electronic health records
F Rodriguez, S Chung, MR Blum, A Coulet, S Basu, LP Palaniappan
Journal of the American Heart Association 8 (14), e011874, 2019
Integration and publication of heterogeneous text-mined relationships on the Semantic Web
A Coulet, Y Garten, M Dumontier, RB Altman, MA Musen, NH Shah
Journal of biomedical semantics 2 (2), 1-16, 2011
Method and system for extraction and normalization of relationships via ontology induction
A Coulet, NH Shah, Y Garten, M Musen, RB Altman
US Patent 10,025,774, 2018
BioPortal: ontologies and integrated data resources at the click of a mouse
P Whetzel, N Shah, N Noy, B Dai, M Dorf, N Griffith, C Jonquet, C Youn, ...
Nature Precedings, 1-1, 2009
Ontology-guided data preparation for discovering genotype-phenotype relationships
A Coulet, M Smaïl-Tabbone, P Benlian, A Napoli, MD Devignes
BMC bioinformatics 9, 1-9, 2008
Suggested ontology for pharmacogenomics (SO-Pharm): modular construction and preliminary testing
A Coulet, M Smaïl-Tabbone, A Napoli, MD Devignes
On the Move to Meaningful Internet Systems 2006: OTM 2006 Workshops: OTM …, 2006
PGxO and PGxLOD: a reconciliation of pharmacogenomic knowledge of various provenances, enabling further comparison
P Monnin, J Legrand, G Husson, P Ringot, A Tchechmedjiev, C Jonquet, ...
BMC bioinformatics 20 (4), 1-16, 2019
Using pattern structures for analyzing ontology-based annotations of biomedical data
A Coulet, F Domenach, M Kaytoue, A Napoli
Formal Concept Analysis: 11th International Conference, ICFCA 2013, Dresden …, 2013
PGxCorpus, a manually annotated corpus for pharmacogenomics
J Legrand, R Gogdemir, C Bousquet, K Dalleau, MD Devignes, W Digan, ...
Scientific data 7 (1), 3, 2020
Semantically enabling pharmacogenomic data for the realization of personalized medicine
M Samwald, A Coulet, I Huerga, RL Powers, JS Luciano, RR Freimuth, ...
Pharmacogenomics 13 (2), 201-212, 2012
SNP-Converter: An ontology-based solution to reconcile heterogeneous SNP descriptions for pharmacogenomic studies
A Coulet, M Smaïl-Tabbone, P Benlian, A Napoli, MD Devignes
Data Integration in the Life Sciences: Third International Workshop, DILS …, 2006
Syntax-based transfer learning for the task of biomedical relation extraction
J Legrand, Y Toussaint, C Raïssi, A Coulet
Journal of Biomedical Semantics 12 (1), 1-11, 2021
Extracting disease-symptom relationships by learning syntactic patterns from dependency graphs
M Hassan, O Makkaoui, A Coulet, Y Toussaint
BioNLP 15, 184, 2015
Using ontology-based annotation to profile disease research
Y Liu, A Coulet, P LePendu, NH Shah
Journal of the American Medical Informatics Association 19 (e1), e177-e186, 2012
Investigating ADR mechanisms with Explainable AI: a feasibility study with knowledge graph mining
E Bresso, P Monnin, C Bousquet, FE Calvier, NC Ndiaye, N Petitpain, ...
BMC medical informatics and decision making 21 (1), 171, 2021
Learning from biomedical linked data to suggest valid pharmacogenes
K Dalleau, Y Marzougui, S Da Silva, P Ringot, NC Ndiaye, A Coulet
Journal of biomedical semantics 8 (1), 1-12, 2017
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