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Adrien Coulet
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Using text to build semantic networks for pharmacogenomics
A Coulet, NH Shah, Y Garten, M Musen, RB Altman
Journal of biomedical informatics 43 (6), 1009-1019, 2010
1342010
NCBO Resource Index: Ontology-based search and mining of biomedical resources
C Jonquet, P LePendu, S Falconer, A Coulet, NF Noy, MA Musen, ...
Journal of Web Semantics 9 (3), 316-324, 2011
1262011
Recent progress in automatically extracting information from the pharmacogenomic literature
Y Garten, A Coulet, RB Altman
Pharmacogenomics 11 (10), 1467-1489, 2010
1032010
Atherosclerotic cardiovascular disease risk prediction in disaggregated Asian and Hispanic subgroups using electronic health records
F Rodriguez, S Chung, MR Blum, A Coulet, S Basu, LP Palaniappan
Journal of the American Heart Association 8 (14), e011874, 2019
812019
Creating fair models of atherosclerotic cardiovascular disease risk
S Pfohl, B Marafino, A Coulet, F Rodriguez, L Palaniappan, NH Shah
Proceedings of the 2019 AAAI/ACM Conference on AI, Ethics, and Society, 271-278, 2019
702019
Results of the ontology alignment evaluation initiative 2020
MAN Pour, A Algergawy, R Amini, D Faria, I Fundulaki, I Harrow, ...
15th International Workshop on Ontology Matching (OM 2020) 2788, 92-138, 2020
612020
Integration and publication of heterogeneous text-mined relationships on the Semantic Web
A Coulet, Y Garten, M Dumontier, RB Altman, MA Musen, NH Shah
Journal of biomedical semantics 2, 1-16, 2011
502011
BioPortal: Ontologies and Integrated Data Resources at the Click of the Mouse
PL Whetzel, NH Shah, NF Noy, B Dai, M Dorf, N Griffith, C Jonquet, ...
1st International Conference on Biomedical Ontology (ICBO 2009), Poster …, 2009
452009
Method and system for extraction and normalization of relationships via ontology induction
A Coulet, NH Shah, Y Garten, M Musen, RB Altman
US Patent 10,025,774, 2018
442018
PGxO and PGxLOD: a reconciliation of pharmacogenomic knowledge of various provenances, enabling further comparison
P Monnin, J Legrand, G Husson, P Ringot, A Tchechmedjiev, C Jonquet, ...
BMC bioinformatics 20, 1-16, 2019
382019
Suggested ontology for pharmacogenomics (SO-Pharm): modular construction and preliminary testing
A Coulet, M Smaïl-Tabbone, A Napoli, MD Devignes
OTM Confederated International Conferences" On the Move to Meaningful …, 2006
362006
Ontology-guided data preparation for discovering genotype-phenotype relationships
A Coulet, M Smaïl-Tabbone, P Benlian, A Napoli, MD Devignes
BMC bioinformatics 9, 1-9, 2008
352008
PGxCorpus, a manually annotated corpus for pharmacogenomics
J Legrand, R Gogdemir, C Bousquet, K Dalleau, MD Devignes, W Digan, ...
Scientific data 7 (1), 3, 2020
272020
Using pattern structures for analyzing ontology-based annotations of biomedical data
A Coulet, F Domenach, M Kaytoue, A Napoli
International Conference on Formal Concept Analysis, 76-91, 2013
272013
Extracting disease-symptom relationships by learning syntactic patterns from dependency graphs
M Hassan, O Makkaoui, A Coulet, Y Toussaint
BioNLP 15, 184, 2015
212015
Semantically enabling pharmacogenomic data for the realization of personalized medicine
M Samwald, A Coulet, I Huerga, RL Powers, JS Luciano, RR Freimuth, ...
Pharmacogenomics 13 (2), 201-212, 2012
212012
Syntax-based transfer learning for the task of biomedical relation extraction
J Legrand, Y Toussaint, C Raïssi, A Coulet
Journal of Biomedical Semantics 12, 1-11, 2021
202021
SNP-Converter: An ontology-based solution to reconcile heterogeneous SNP descriptions for pharmacogenomic studies
A Coulet, M Smaïl-Tabbone, P Benlian, A Napoli, MD Devignes
International Workshop on Data Integration in the Life Sciences, 82-93, 2006
172006
Investigating ADR mechanisms with explainable AI: a feasibility study with knowledge graph mining
E Bresso, P Monnin, C Bousquet, FÉ Calvier, NC Ndiaye, N Petitpain, ...
BMC medical informatics and decision making 21 (1), 171, 2021
152021
Technical, ethical, legal, and societal challenges with digital twin systems for the management of chronic diseases in children and young people
D Drummond, A Coulet
Journal of Medical Internet Research 24 (10), e39698, 2022
142022
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Articles 1–20