| Zero-point entropy in ‘spin ice’ AP Ramirez, A Hayashi, RJ Cava, R Siddharthan, BS Shastry Nature 399 (6734), 333-335, 1999 | 1501 | 1999 |
| PhyloGibbs: a Gibbs sampling motif finder that incorporates phylogeny R Siddharthan, ED Siggia, E Van Nimwegen PLoS computational biology 1 (7), e67, 2005 | 363 | 2005 |
| Ising pyrochlore magnets: Low-temperature properties,“ice rules,” and beyond R Siddharthan, BS Shastry, AP Ramirez, A Hayashi, RJ Cava, ... Physical review letters 83 (9), 1854, 1999 | 330 | 1999 |
| Crystal-field interaction in the pyrochlore magnet S Rosenkranz, AP Ramirez, A Hayashi, RJ Cava, R Siddharthan, ... Journal of Applied Physics 87 (9), 5914-5916, 2000 | 225 | 2000 |
| Dinucleotide weight matrices for predicting transcription factor binding sites: generalizing the position weight matrix R Siddharthan PloS one 5 (3), e9722, 2010 | 131 | 2010 |
| Rapid evolution of Cse4p-rich centromeric DNA sequences in closely related pathogenic yeasts, Candida albicans and Candida dubliniensis S Padmanabhan, J Thakur, R Siddharthan, K Sanyal Proceedings of the National Academy of Sciences 105 (50), 19797-19802, 2008 | 93 | 2008 |
| Square kagome quantum antiferromagnet and the eight-vertex model R Siddharthan, A Georges Physical Review B 65 (1), 014417, 2001 | 69 | 2001 |
| Spin ordering and partial ordering in holmium titanate and related systems R Siddharthan, BS Shastry, AP Ramirez Physical Review B 63 (18), 184412, 2001 | 69 | 2001 |
| Repeat-Associated Fission Yeast-Like Regional Centromeres in the Ascomycetous Budding Yeast Candida tropicalis G Chatterjee, SR Sankaranarayanan, K Guin, Y Thattikota, ... PLoS genetics 12 (2), e1005839, 2016 | 60 | 2016 |
| Loss of centromere function drives karyotype evolution in closely related Malassezia species SR Sankaranarayanan, G Ianiri, MA Coelho, MH Reza, BC Thimmappa, ... Elife 9, e53944, 2020 | 46 | 2020 |
| Proteogenomics produces comprehensive and highly accurate protein-coding gene annotation in a complete genome assembly of Malassezia sympodialis Y Zhu, PG Engström, C Tellgren-Roth, CD Baudo, JC Kennell, S Sun, ... Nucleic Acids Research 45 (5), 2629-2643, 2017 | 46 | 2017 |
| Gene expression from random libraries of yeast promoters M Ligr, R Siddharthan, FR Cross, ED Siggia Genetics 172 (4), 2113-2122, 2006 | 37 | 2006 |
| PhyloGibbs-MP: module prediction and discriminative motif-finding by Gibbs sampling R Siddharthan PLoS computational biology 4 (8), e1000156, 2008 | 33 | 2008 |
| Dynamical mean-field theory of resonating-valence-bond antiferromagnets A Georges, R Siddharthan, S Florens Physical review letters 87 (27), 277203, 2001 | 32 | 2001 |
| Sigma: multiple alignment of weakly-conserved non-coding DNA sequence R Siddharthan BMC bioinformatics 7, 1-15, 2006 | 29 | 2006 |
| The TAF9 C-terminal conserved region domain is required for SAGA and TFIID promoter occupancy to promote transcriptional activation M Saint, S Sawhney, I Sinha, RP Singh, R Dahiya, A Thakur, ... Molecular and Cellular Biology 34 (9), 1547-1563, 2014 | 20 | 2014 |
| Singularities in the Bethe solution of the XXX and XXZ Heisenberg spin chains R Siddharthan arXiv preprint cond-mat/9804210, 1998 | 18 | 1998 |
| Functional and Comparative Analysis of Centromeres Reveals Clade-Specific Genome Rearrangements in Candida auris and a Chromosome Number Change in … A Narayanan, RN Vadnala, P Ganguly, P Selvakumar, SM Rudramurthy, ... MBio 12 (3), 10.1128/mbio. 00905-21, 2021 | 16 | 2021 |
| PhyloGibbs: A Gibbs sampler incorporating phylogenetic information R Siddharthan, E van Nimwegen, ED Siggia Regulatory Genomics: RECOMB 2004 International Workshop, RRG 2004, San Diego …, 2005 | 15 | 2005 |
| The Complex Spatio-Temporal Regulation of the Drosophila Myoblast Attractant Gene duf/kirre KG Guruharsha, M Ruiz-Gomez, HA Ranganath, R Siddharthan, ... PLoS One 4 (9), e6960, 2009 | 14 | 2009 |
