| An efficient algorithm for gene/species trees parsimonious reconciliation with losses, duplications and transfers JP Doyon, C Scornavacca, KY Gorbunov, GJ Szöllősi, V Ranwez, V Berry RECOMB International Workshop on Comparative Genomics, 93-108, 2010 | 161 | 2010 |
| Models, algorithms and programs for phylogeny reconciliation JP Doyon, V Ranwez, V Daubin, V Berry Briefings in bioinformatics 12 (5), 392-400, 2011 | 158 | 2011 |
| On the interpretation of bootstrap trees: appropriate threshold of clade selection and induced gain V Berry, O Gascuel Molecular Biology and Evolution 13 (7), 999-1011, 1996 | 150 | 1996 |
| Sequencing of the smallest Apicomplexan genome from the human pathogen Babesia microti E Cornillot, K Hadj-Kaddour, A Dassouli, B Noel, V Ranwez, B Vacherie, ... Nucleic acids research 40 (18), 9102-9114, 2012 | 134 | 2012 |
| Inferring evolutionary trees with strong combinatorial evidence V Berry, O Gascuel Theoretical computer science 240 (2), 271-298, 2000 | 100 | 2000 |
| One fig to bind them all: host conservatism in a fig wasp community unraveled by cospeciation analyses among pollinating and nonpollinating fig wasps E Jousselin, S Van Noort, V Berry, JY Rasplus, N Rřnsted, JC Erasmus, ... Evolution 62 (7), 1777-1797, 2008 | 92 | 2008 |
| SDM: a fast distance-based approach for (super) tree building in phylogenomics A Criscuolo, V Berry, EJP Douzery, O Gascuel Systematic Biology 55 (5), 740-755, 2006 | 91 | 2006 |
| Multiple nuclear genes stabilize the phylogenetic backbone of the genus Quercus F Hubert, GW Grimm, E Jousselin, V Berry, A Franc, A Kremer Systematics and Biodiversity 12 (4), 405-423, 2014 | 90 | 2014 |
| Quartet cleaning: improved algorithms and simulations V Berry, T Jiang, P Kearney, M Li, T Wareham European Symposium on Algorithms, 313-324, 1999 | 88 | 1999 |
| Computing galled networks from real data DH Huson, R Rupp, V Berry, P Gambette, C Paul Bioinformatics 25 (12), i85-i93, 2009 | 71 | 2009 |
| A practical algorithm for recovering the best supported edges of an evolutionary tree V Berry, D Bryant, T Jiang, PE Kearney, M Li, T Wareham, H Zhang SODA, 287-296, 2000 | 70 | 2000 |
| Inferring evolutionary trees with strong combinatorial evidence V Berry, O Gascuel International Computing and Combinatorics Conference, 111-123, 1997 | 61 | 1997 |
| Genetic structure and evolution of the Leishmania genus in Africa and Eurasia: what does MLSA tell us F El Baidouri, L Diancourt, V Berry, F Chevenet, F Pratlong, P Marty, ... PLoS neglected tropical diseases 7 (6), e2255, 2013 | 60 | 2013 |
| PhySIC_IST: cleaning source trees to infer more informative supertrees C Scornavacca, V Berry, V Lefort, EJP Douzery, V Ranwez BMC bioinformatics 9 (1), 413, 2008 | 55 | 2008 |
| PhySIC: a veto supertree method with desirable properties V Ranwez, V Berry, A Criscuolo, PH Fabre, S Guillemot, C Scornavacca, ... Systematic Biology 56 (5), 798-817, 2007 | 52 | 2007 |
| A structured family of clustering and tree construction methods D Bryant, V Berry Advances in Applied Mathematics 27 (4), 705-732, 2001 | 48 | 2001 |
| Faster reliable phylogenetic analysis V Berry, D Bryant Proceedings of the third annual international conference on Computational …, 1999 | 43 | 1999 |
| Representing a set of reconciliations in a compact way C Scornavacca, W Paprotny, V Berry, V Ranwez Journal of bioinformatics and computational biology 11 (02), 1250025, 2013 | 38 | 2013 |
| Reconciliation and local gene tree rearrangement can be of mutual profit TH Nguyen, V Ranwez, S Pointet, AMA Chifolleau, JP Doyon, V Berry Algorithms for Molecular Biology 8 (1), 12, 2013 | 35 | 2013 |
| Maximum agreement and compatible supertrees V Berry, F Nicolas Annual Symposium on Combinatorial Pattern Matching, 205-219, 2004 | 34 | 2004 |
Vincent Ranwez Professor at Montpellier SupAgroVerified email at supagro.inra.fr
