Michael Hackenberg
Michael Hackenberg
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Zitiert von
Zitiert von
Nontemplated nucleotide additions distinguish the small RNA composition in cells from exosomes
D Koppers-Lalic, M Hackenberg, IV Bijnsdorp, MAJ van Eijndhoven, ...
Cell reports 8 (6), 1649-1658, 2014
miRanalyzer: a microRNA detection and analysis tool for next-generation sequencing experiments
M Hackenberg, M Sturm, D Langenberger, JM Falcon-Perez, AM Aransay
Nucleic acids research 37 (suppl_2), W68-W76, 2009
miRanalyzer: an update on the detection and analysis of microRNAs in high-throughput sequencing experiments
M Hackenberg, N Rodríguez-Ezpeleta, AM Aransay
Nucleic acids research 39 (suppl_2), W132-W138, 2011
CpGcluster: a distance-based algorithm for CpG-island detection
M Hackenberg, C Previti, PL Luque-Escamilla, P Carpena, ...
BMC bioinformatics 7, 1-13, 2006
sRNAtoolbox: an integrated collection of small RNA research tools
A Rueda, G Barturen, R Lebrón, C Gómez-Martín, Á Alganza, JL Oliver, ...
Nucleic acids research 43 (W1), W467-W473, 2015
MirGeneDB 2.0: the metazoan microRNA complement
B Fromm, D Domanska, E Høye, V Ovchinnikov, W Kang, ...
Nucleic Acids Research 48 (D1), D132-D141, 2020
TargetSpy: a supervised machine learning approach for microRNA target prediction
M Sturm, M Hackenberg, D Langenberger, D Frishman
BMC bioinformatics 11, 1-17, 2010
Differential expression of micro RNA s and other small RNA s in barley between water and drought conditions
M Hackenberg, P Gustafson, P Langridge, BJ Shi
Plant biotechnology journal 13 (1), 2-13, 2015
Sensing of latent EBV infection through exosomal transfer of 5′ pppRNA
SR Baglio, MAJ van Eijndhoven, D Koppers-Lalic, J Berenguer, ...
Proceedings of the National Academy of Sciences 113 (5), E587-E596, 2016
sRNAbench and sRNAtoolbox 2019: intuitive fast small RNA profiling and differential expression
E Aparicio-Puerta, R Lebrón, A Rueda, C Gómez-Martín, S Giannoukakos, ...
Nucleic acids research 47 (W1), W530-W535, 2019
Non-invasive prostate cancer detection by measuring miRNA variants (isomiRs) in urine extracellular vesicles
D Koppers-Lalic, M Hackenberg, R De Menezes, B Misovic, M Wachalska, ...
Oncotarget 7 (16), 22566, 2016
Surface analysis of Dicrocoelium dendriticum. The molecular characterization of exosomes reveals the presence of miRNAs
D Bernal, M Trelis, S Montaner, F Cantalapiedra, A Galiano, ...
Journal of proteomics 105, 232-241, 2014
Characterization of phosphorus-regulated miR399 and miR827 and their isomirs in barley under phosphorus-sufficient and phosphorus-deficient conditions
M Hackenberg, BJ Shi, P Gustafson, P Langridge
BMC plant biology 13, 1-17, 2013
IsoFinder: computational prediction of isochores in genome sequences
JL Oliver, P Carpena, M Hackenberg, P Bernaola-Galván
Nucleic acids research 32 (suppl_2), W287-W292, 2004
A comprehensive expression profile of microRNAs and other classes of non-coding small RNAs in barley under phosphorous-deficient and-sufficient conditions
M Hackenberg, POJ Huang, CY Huang, BUJUN Shi, P Gustafson, ...
DNA research 20 (2), 109-125, 2013
Level statistics of words: Finding keywords in literary texts and symbolic sequences
P Carpena, P Bernaola-Galván, M Hackenberg, AV Coronado, JL Oliver
Physical Review E 79 (3), 035102, 2009
sRNAbench: profiling of small RNAs and its sequence variants in single or multi-species high-throughput experiments
G Barturen, A Rueda, M Hamberg, A Alganza, R Lebron, M Kotsyfakis, ...
Methods in Next Generation Sequencing 1 (1), 21-31, 2014
A systems level analysis reveals transcriptomic and proteomic complexity in Ixodes ricinus midgut and salivary glands during early attachment and feeding
A Schwarz, S Tenzer, M Hackenberg, J Erhart, A Gerhold-Ay, J Mazur, ...
Molecular & Cellular Proteomics 13 (10), 2725-2735, 2014
Isochore chromosome maps of the human genome
JL Oliver, P Carpena, R Román-Roldán, T Mata-Balaguer, ...
Gene 300 (1-2), 117-127, 2002
MirGeneDB 2.1: toward a complete sampling of all major animal phyla
B Fromm, E Høye, D Domanska, X Zhong, E Aparicio-Puerta, ...
Nucleic Acids Research 50 (D1), D204-D210, 2022
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