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Sean L Seyler
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MDAnalysis: a Python package for the rapid analysis of molecular dynamics simulations
RJ Gowers, M Linke, J Barnoud, TJE Reddy, MN Melo, SL Seyler, ...
Proceedings of the 15th Python in Science Conference, 98-105, 2016
11242016
Path similarity analysis: a method for quantifying macromolecular pathways
SL Seyler, A Kumar, MF Thorpe, O Beckstein
PLoS computational biology 11 (10), e1004568, 2015
652015
Sampling large conformational transitions: adenylate kinase as a testing ground
SL Seyler, O Beckstein
Molecular Simulation 40 (10-11), 855-877, 2014
472014
Structure of the SLC4 transporter Bor1p in an inward‐facing conformation
N Coudray, SL Seyler, R Lasala, Z Zhang, KM Clark, ME Dumont, ...
Protein Science 26 (1), 130-145, 2017
352017
Long-time persistence of hydrodynamic memory boosts microparticle transport
SL Seyler, S Pressé
Physical Review Research 1 (3), 032003(R), 2019
162019
Surmounting potential barriers: Hydrodynamic memory hedges against thermal fluctuations in particle transport
SL Seyler, S Pressé
The Journal of Chemical Physics 153 (4), 041102, 2020
92020
Hydrodynamic interaction facilitates the unsteady transport of two neighboring vesicles
J Lee, SL Seyler, S Pressé
The Journal of Chemical Physics 151 (9), 094108, 2019
52019
A numerical study on microfluidic devices to maintain the concentration and purity of dielectrophoresis-induced separated fractions of analyte
AKMFK Rasel, SL Seyler, MA Hayes
Analytical and Bioanalytical Chemistry, 2023
22023
Molecular hydrodynamic theory of the velocity autocorrelation function
SL Seyler, CE Seyler
The Journal of Chemical Physics 159 (5), 054108, 2023
12023
Swimming, fast and slow: strategy and survival of bacterial predators in response to chemical cues
M Carlson, SL Seyler, S Pressé
bioRxiv, 2020.11. 11.377200, 2020
12020
Computational Approaches to Simulation and Analysis of Large Conformational Transitions in Proteins
SL Seyler
Arizona State University, 2017
12017
Quantifying Macromolecular Conformational Transition Pathways
O Beckstein, SL Seyler, A Kumar, MF Thorpe
Biophysical Journal 108 (2), 13a, 2015
12015
Hydrodynamic memory and driven microparticle transport: hedging against fluctuating sources of energy
S Seyler
Bulletin of the American Physical Society 65, 2020
2020
Predation Strategies of Bdellovibrio bacteriovorus
M Carlson, SL Seyler, S Pressé
Biophysical Journal 118 (3), 127a, 2020
2020
Hydrodynamic Brownian motion and nanoscale transport efficiency in liquids
SL Seyler, S Pressé
APS March Meeting Abstracts 64 (2), 2019
2019
AdKGromacsTutorial Documentation
S Seyler, O Beckstein
2018
Fluctuating Hydrodynamics in the 13-moment Approximation for Simulating Biomacromolecular Nanomachines
SL Seyler, CE Seyler, O Beckstein
APS March Meeting Abstracts 63 (1), 2018
2018
Simulating conformational transitions of the transmembrane symporter
T Colburn, S Seyler, O Beckstein
Annual Meeting of the APS Four Corners Section 61, 2016
2016
Quantitative comparison of macromolecular pathways
O Beckstein, S Seyler, A Kumar, M Thorpe
ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 251, 2016
2016
Quantifying Macromolecular Transition Paths with Path Similarity Analysis
SL Seyler, A Kumar, T Colburn, MF Thorpe, O Beckstein
Biophysical Journal 110 (3), 523a, 2016
2016
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