| Unified rational protein engineering with sequence-based deep representation learning EC Alley, G Khimulya, S Biswas, M AlQuraishi, GM Church Nature methods 16 (12), 1315-1322, 2019 | 897 | 2019 |
| Phytochromes function as thermosensors in Arabidopsis JH Jung, M Domijan, C Klose, S Biswas, D Ezer, M Gao, AK Khattak, ... Science 354 (6314), 886-889, 2016 | 795 | 2016 |
| Low-N protein engineering with data-efficient deep learning S Biswas, G Khimulya, EC Alley, KM Esvelt, GM Church Nature methods 18 (4), 389-396, 2021 | 328 | 2021 |
| Single-sequence protein structure prediction using a language model and deep learning R Chowdhury, N Bouatta, S Biswas, C Floristean, A Kharkar, K Roy, ... Nature Biotechnology 40 (11), 1617-1623, 2022 | 263 | 2022 |
| The evening complex coordinates environmental and endogenous signals in Arabidopsis D Ezer, JH Jung, H Lan, S Biswas, L Gregoire, MS Box, V Charoensawan, ... Nature plants 3 (7), 1-12, 2017 | 237 | 2017 |
| Pseudomonas syringae type III effector HopBB1 promotes host transcriptional repressor degradation to regulate phytohormone responses and virulence L Yang, PJPL Teixeira, S Biswas, OM Finkel, Y He, I Salas-Gonzalez, ... Cell host & microbe 21 (2), 156-168, 2017 | 124 | 2017 |
| The G-Box transcriptional regulatory code in Arabidopsis D Ezer, SJK Shepherd, A Brestovitsky, P Dickinson, S Cortijo, ... Plant physiology 175 (2), 628-640, 2017 | 108 | 2017 |
| Learning microbial interaction networks from metagenomic count data S Biswas, M Mcdonald, DS Lundberg, JL Dangl, V Jojic Journal of Computational Biology 23 (6), 526-535, 2016 | 76 | 2016 |
| The Molecular Basis of Host Specialization in Bean Pathovars of Pseudomonas syringae DA Baltrus, MT Nishimura, KM Dougherty, S Biswas, MS Mukhtar, ... Molecular plant-microbe interactions 25 (7), 877-888, 2012 | 73 | 2012 |
| Toward machine-guided design of proteins S Biswas, G Kuznetsov, PJ Ogden, NJ Conway, RP Adams, GM Church BioRxiv, 337154, 2018 | 37 | 2018 |
| Variable Suites of Non-effector Genes Are Co-regulated in the Type III Secretion Virulence Regulon across the Pseudomonas syringae Phylogeny TS Mucyn, S Yourstone, AL Lind, S Biswas, MT Nishimura, DA Baltrus, ... PLoS pathogens 10 (1), e1003807, 2014 | 30 | 2014 |
| Tradict enables accurate prediction of eukaryotic transcriptional states from 100 marker genes S Biswas, K Kerner, PJPL Teixeira, JL Dangl, V Jojic, PA Wigge Nature communications 8 (1), 15309, 2017 | 18* | 2017 |
| Biological averaging in RNA-seq S Biswas, YN Agrawal, TS Mucyn, JL Dangl, CD Jones arXiv preprint arXiv:1309.0670, 2013 | 16 | 2013 |
| What to trust in a Magnetotelluric Model KK Roy, S Dey, S Srivastava, S Biswas J. Indian Geophys. Union 8 (2), 157-171, 2004 | 7 | 2004 |
| Principles of machine learning-guided protein engineering S Biswas Harvard University, 2020 | 3 | 2020 |
| The latent logarithm S Biswas arXiv preprint arXiv:1605.06064, 2016 | 2 | 2016 |
| Single-sequence protein structure prediction using a language model and deep learning (Oct, 10.1038/s41587-022-01432-w, 2022) R Chowdhury, N Bouatta, S Biswas, C Floristean, A Kharkar, K Roy, ... NATURE BIOTECHNOLOGY 40 (11), 1692-1692, 2022 | 1 | 2022 |
| CumbieJasonBotanyPlantPathologyVariableSuitesNon-Effector. pdf TS Mucyn, S Yourstone, AL Lind, S Biswas, MT Nishimura, DA Baltrus, ... | | 2017 |
| Phytochromes function as thermosensors in JH Jung, M Domijan, C Klose, S Biswas, D Ezer, M Gao, AK Khattak, ... American Association for the Advancement of Science, 2016 | | 2016 |
| Variable Suites of Non-effector Genes Are Co-regulated in the Type III Secretion TS Mucyn, S Yourstone, AL Lind, S Biswas, MT Nishimura | | 2014 |
