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Henrik Mannerström
Henrik Mannerström
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Titel
Zitiert von
Zitiert von
Jahr
Non-stationary gaussian process regression with hamiltonian monte carlo
M Heinonen, H Mannerström, J Rousu, S Kaski, H Lähdesmäki
Artificial Intelligence and Statistics, 732-740, 2016
1332016
Learning unknown ODE models with Gaussian processes
M Heinonen, C Yildiz, H Mannerström, J Intosalmi, H Lähdesmäki
International conference on machine learning, 1959-1968, 2018
822018
In vivo kinetics of transcription initiation of the lar promoter in Escherichia coli. Evidence for a sequential mechanism with two rate-limiting steps
M Kandhavelu, H Mannerström, A Gupta, A Häkkinen, J Lloyd-Price, ...
BMC Systems Biology 5, 1-9, 2011
462011
Identification of global regulators of T-helper cell lineage specification
K Kanduri, S Tripathi, A Larjo, H Mannerström, U Ullah, R Lund, ...
Genome medicine 7, 1-11, 2015
412015
Learning stochastic differential equations with gaussian processes without gradient matching
C Yildiz, M Heinonen, J Intosalmi, H Mannerstrom, H Lahdesmaki
2018 IEEE 28th International Workshop on Machine Learning for Signal …, 2018
372018
Effects of the promoter open complex formation on gene expression dynamics
AS Ribeiro, A Häkkinen, H Mannerström, J Lloyd-Price, O Yli-Harja
Physical Review E 81 (1), 011912, 2010
262010
Bayesian metabolic flux analysis reveals intracellular flux couplings
M Heinonen, M Osmala, H Mannerström, J Wallenius, S Kaski, J Rousu, ...
Bioinformatics 35 (14), i548-i557, 2019
222019
A probabilistic generative model for quantification of DNA modifications enables analysis of demethylation pathways
T Äijö, Y Huang, H Mannerström, L Chavez, A Tsagaratou, A Rao, ...
Genome Biology 17, 1-22, 2016
172016
lgpr: an interpretable non-parametric method for inferring covariate effects from longitudinal data
J Timonen, H Mannerström, A Vehtari, H Lähdesmäki
Bioinformatics 37 (13), 1860-1867, 2021
112021
Inference of kinetic parameters of delayed stochastic models of gene expression using a Markov chain approximation
H Mannerstrom, O Yli-Harja, AS Ribeiro
EURASIP Journal on Bioinformatics and Systems Biology 2011, 1-6, 2011
92011
SCHiRM: Single Cell Hierarchical Regression Model to detect dependencies in read count data
J Intosalmi, H Mannerström, S Hiltunen, H Lähdesmäki
BioRxiv, 335695, 2018
72018
Cell-to-cell diversity in protein levels of a gene driven by a tetracycline inducible promoter
OP Smolander, M Kandhavelu, H Mannerström, E Lihavainen, ...
BMC molecular biology 12, 1-12, 2011
62011
An interpretable probabilistic machine learning method for heterogeneous longitudinal studies
J Timonen, H Mannerström, A Vehtari, H Lähdesmäki
arXiv preprint arXiv:1912.03549, 2019
42019
PairGP: Gaussian process modeling of longitudinal data from paired multi-condition studies
M Vantini, H Mannerström, S Rautio, H Ahlfors, B Stockinger, ...
Computers in Biology and Medicine 143, 105268, 2022
32022
A probabilistic framework for molecular network structure inference by means of mechanistic modeling
J Timonen, H Mannerström, H Lähdesmäki, J Intosalmi
IEEE/ACM Transactions on Computational Biology and Bioinformatics 16 (6 …, 2018
32018
Bayesian Metabolic Flux Analysis reveals intracellular flux couplings
M Heinonen, M Osmala, H Mannerström, J Wallenius, S Kaski, J Rousu, ...
arXiv preprint arXiv:1804.06673, 2018
12018
Identification of global regulators of T-helper cell lineage specification
K Kanduri, S Tripathi, A Larjo, H Mannerström, U Ullah, R Lund, ...
SCANDINAVIAN JOURNAL OF IMMUNOLOGY 83 (5), 379-379, 2016
2016
A probabilistic model for accurate quantification of DNA methylation modifications.
T Äijö, Y Huang, H Mannerström, L Chavez, A Tsagaratou, A Rao, ...
2016
Dynamics of Gene Expression under Tetracycline Inducible Promoters
OP Smolander, M Kandhavelu, H Mannerström, E Lihavainen, ...
Eight International Workshop on Computational Systems Biology, WCSB 2011 …, 2011
2011
Supplementary File 2: In vivo kinetics of transcription initiation of the lar promoter in Escherichia coli. Evidence for
M Kandhavelu, H Mannerström, A Gupta, A Häkkinen, J Lloyd-Price, ...
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