Universal sample preparation method for proteome analysis JR Wiśniewski, A Zougman, N Nagaraj, M Mann Nature methods 6 (5), 359-362, 2009 | 7982 | 2009 |
Accurate proteome-wide label-free quantification by delayed normalization and maximal peptide ratio extraction, termed MaxLFQ J Cox, MY Hein, CA Luber, I Paron, N Nagaraj, M Mann Molecular & cellular proteomics 13 (9), 2513-2526, 2014 | 4938 | 2014 |
Minimal, encapsulated proteomic-sample processing applied to copy-number estimation in eukaryotic cells NA Kulak, G Pichler, I Paron, N Nagaraj, M Mann Nature methods 11 (3), 319-324, 2014 | 1740 | 2014 |
A human interactome in three quantitative dimensions organized by stoichiometries and abundances MY Hein, NC Hubner, I Poser, J Cox, N Nagaraj, Y Toyoda, IA Gak, ... Cell 163 (3), 712-723, 2015 | 1326 | 2015 |
Deep proteome and transcriptome mapping of a human cancer cell line N Nagaraj, JR Wisniewski, T Geiger, J Cox, M Kircher, J Kelso, S Pääbo, ... Molecular systems biology 7 (1), 548, 2011 | 1195 | 2011 |
Mass spectrometry-based proteomics using Q Exactive, a high-performance benchtop quadrupole Orbitrap mass spectrometer A Michalski, E Damoc, JP Hauschild, O Lange, A Wieghaus, A Makarov, ... Molecular & cellular proteomics 10 (9), 2011 | 1089 | 2011 |
A practical guide to the MaxQuant computational platform for SILAC-based quantitative proteomics J Cox, I Matic, M Hilger, N Nagaraj, M Selbach, JV Olsen, M Mann Nature protocols 4 (5), 698-705, 2009 | 878 | 2009 |
System-wide perturbation analysis with nearly complete coverage of the yeast proteome by single-shot ultra HPLC runs on a bench top Orbitrap N Nagaraj, NA Kulak, J Cox, N Neuhauser, K Mayr, O Hoerning, O Vorm, ... Molecular & Cellular Proteomics 11 (3), 2012 | 472 | 2012 |
The coming age of complete, accurate, and ubiquitous proteomes M Mann, NA Kulak, N Nagaraj, J Cox Molecular cell 49 (4), 583-590, 2013 | 413 | 2013 |
Deep Proteomics of Mouse Skeletal Muscle Enables Quantitation of Protein Isoforms, Metabolic Pathways, and Transcription Factors*[S] AS Deshmukh, M Murgia, N Nagaraj, JT Treebak, J Cox, M Mann Molecular & Cellular Proteomics 14 (4), 841-853, 2015 | 305 | 2015 |
Global proteome turnover analyses of the yeasts S. cerevisiae and S. pombe R Christiano, N Nagaraj, F Fröhlich, TC Walther Cell reports 9 (5), 1959-1965, 2014 | 298 | 2014 |
Brain phosphoproteome obtained by a FASP-based method reveals plasma membrane protein topology JR Wisniewski, N Nagaraj, A Zougman, F Gnad, M Mann Journal of proteome research 9 (6), 3280-3289, 2010 | 292 | 2010 |
Single muscle fiber proteomics reveals fiber-type-specific features of human muscle aging M Murgia, L Toniolo, N Nagaraj, S Ciciliot, V Vindigni, S Schiaffino, ... Cell reports 19 (11), 2396-2409, 2017 | 273 | 2017 |
Initial quantitative proteomic map of 28 mouse tissues using the SILAC mouse T Geiger, A Velic, B Macek, E Lundberg, C Kampf, N Nagaraj, M Uhlen, ... Molecular & Cellular Proteomics 12 (6), 1709-1722, 2013 | 255 | 2013 |
Quantitative analysis of the intra-and inter-individual variability of the normal urinary proteome N Nagaraj, M Mann Journal of proteome research 10 (2), 637-645, 2011 | 253 | 2011 |
Proteomics reveals dynamic assembly of repair complexes during bypass of DNA cross-links M Räschle, G Smeenk, RK Hansen, T Temu, Y Oka, MY Hein, N Nagaraj, ... Science 348 (6234), 1253671, 2015 | 231 | 2015 |
Single muscle fiber proteomics reveals unexpected mitochondrial specialization M Murgia, N Nagaraj, AS Deshmukh, M Zeiler, P Cancellara, I Moretti, ... EMBO reports 16 (3), 387-395, 2015 | 196 | 2015 |
Feasibility of large-scale phosphoproteomics with higher energy collisional dissociation fragmentation N Nagaraj, RCJ D’Souza, J Cox, JV Olsen, M Mann Journal of proteome research 9 (12), 6786-6794, 2010 | 192 | 2010 |
Cell-type-resolved quantitative proteomics of murine liver SB Azimifar, N Nagaraj, J Cox, M Mann Cell metabolism 20 (6), 1076-1087, 2014 | 183 | 2014 |
Large-scale phosphosite quantification in tissues by a spike-in SILAC method M Monetti, N Nagaraj, K Sharma, M Mann Nature methods 8 (8), 655-658, 2011 | 179 | 2011 |