Damian Roqueiro

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Karsten BorgwardtProfessor, ETH ZurichVerified email at bsse.ethz.ch
Yang Dai, Ph.DDepartment of Bioengineering, University of Illinois at ChicagoVerified email at uic.edu
Dominik G. GrimmProfessor of Bioinformatics at TUM Campus Straubing, HSWTVerified email at hswt.de
Diana MonsivaisBaylor College of MedicineVerified email at bcm.edu
Detlef WeigelMax Planck Institute for Developmental BiologyVerified email at weigelworld.org
Chang LiuInstitute of Biology, University of HohenheimVerified email at uni-hohenheim.de
Bulun SProfessor of Obstetrics and GynecologyVerified email at northwestern.edu
Yalda AfsharUniversity of California, Los Angeles; David Geffen School of MedicineVerified email at mednet.ucla.edu
Jae wook JeongMichigan State UniversityVerified email at msu.edu
Lei HuangKite PharmaVerified email at kitepharma.com
Anatole GershmanDistinguished Career Professor, LTI, Carnegie Mellon UniversityVerified email at cs.cmu.edu
Bastian RieckMachine Learning & Computational Biology Lab, D-BSSE, ETH ZürichVerified email at bsse.ethz.ch
Michael MoorPhD Student, Machine Learning and Computational Biology Lab, ETH ZurichVerified email at bsse.ethz.ch
congmao wangMax Planck Institute for Developmental BiologyVerified email at tuebingen.mpg.de
Claude BeckerGregor Mendel Institute of Molecular Plant BiologyVerified email at gmi.oeaw.ac.at
david c brooksBrigham and Women's HospitalVerified email at dfci.harvard.edu
Felipe Llinares-LópezGoogle Research, Brain TeamVerified email at google.com
Max HornPhD Student in Machine Learning and Computational Biology, ETH ZürichVerified email at bsse.ethz.ch
Patrice A. SaloméUCLA, Department of Chemistry and BiochemistryVerified email at chem.ucla.edu
Bastian Greshake TzovarasFellow at Center for Research and Interdisciplinarity, Paris & Director of Research at Open HumansVerified email at bio.uni-frankfurt.de

Damian Roqueiro

ETH Zürich

Verified email at bsse.ethz.ch - Homepage

Machine Learning Computational Biology Data Mining


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Genome-wide analysis of local chromatin packing in Arabidopsis thaliana C Wang, C Liu, D Roqueiro, D Grimm, R Schwab, C Becker, C Lanz, ... Genome research 25 (2), 246-256, 2015	207	2015
Genome-wide DNA methylation analysis predicts an epigenetic switch for GATA factor expression in endometriosis MT Dyson, D Roqueiro, D Monsivais, CM Ercan, ME Pavone, DC Brooks, ... PLoS Genet 10 (3), e1004158, 2014	145	2014
Notch1 mediates uterine stromal differentiation and is critical for complete decidualization in the mouse Y Afshar, JW Jeong, D Roqueiro, F DeMayo, J Lydon, F Radtke, R Radnor, ... The FASEB Journal 26 (1), 282-294, 2012	90	2012
Genome-wide progesterone receptor binding: cell type-specific and shared mechanisms in T47D breast cancer cells and primary leiomyoma cells P Yin, D Roqueiro, L Huang, JK Owen, A Xie, A Navarro, D Monsivais, ... PLoS One 7 (1), e29021, 2012	83	2012
Changes in Eutopic Endometrial Gene Expression During the Progression of Experimental Endometriosis in the Baboon, Papio Anubis Y Afshar, J Hastings, D Roqueiro, JW Jeong, LC Giudice, AT Fazleabas Biology of reproduction 88 (2), 44, 1-9, 2013	81	2013
easyGWAS: a cloud-based platform for comparing the results of genome-wide association studies DG Grimm, D Roqueiro, PA Salomé, S Kleeberger, B Greshake, W Zhu, ... The Plant Cell 29 (1), 5-19, 2017	67	2017
Extremely long-range chromatin loops link topological domains to facilitate a diverse antibody repertoire L Montefiori, R Wuerffel, D Roqueiro, B Lajoie, C Guo, T Gerasimova, ... Cell reports 14 (4), 896-906, 2016	46	2016
Counting people using video cameras D Roqueiro, VA Petrushin The International Journal of Parallel, Emergent and Distributed Systems 22 …, 2007	43	2007
Multiple-sensor indoor surveillance system VA Petrushin, G Wei, O Shakil, D Roqueiro, V Gershman The 3rd Canadian conference on computer and robot vision (CRV'06), 40-40, 2006	34	2006
Early recognition of sepsis with Gaussian process temporal convolutional networks and dynamic time warping M Moor, M Horn, B Rieck, D Roqueiro, K Borgwardt Machine Learning for Healthcare Conference, 2-26, 2019	33*	2019
Association mapping in biomedical time series via statistically significant shapelet mining C Bock, T Gumbsch, M Moor, B Rieck, D Roqueiro, K Borgwardt Bioinformatics 34 (13), i438-i446, 2018	18	2018
Genome-wide genetic heterogeneity discovery with categorical covariates F Llinares-López, L Papaxanthos, D Bodenham, D Roqueiro, ... Bioinformatics 33 (12), 1820-1828, 2017	16	2017
SigMod: an exact and efficient method to identify a strongly interconnected disease-associated module in a gene network Y Liu, M Brossard, D Roqueiro, P Margaritte-Jeannin, C Sarnowski, ... Bioinformatics 33 (10), 1536-1544, 2017	16	2017
Methods and Tools in Genome-wide Association Studies AC Gumpinger, D Roqueiro, DG Grimm, KM Borgwardt Computational Cell Biology, 93-136, 2018	13	2018
5th, Kim JJ, Dai Y, Bulun SE: Genome-wide progesterone receptor binding: cell type-specific and shared mechanisms in T47D breast cancer cells and primary leiomyoma cells P Yin, D Roqueiro, L Huang, JK Owen, A Xie, A Navarro, D Monsivais, ... PloS One 7, e29021, 2012	13	2012
In silico phenotyping via co-training for improved phenotype prediction from genotype D Roqueiro, MJ Witteveen, V Anttila, GM Terwindt, ... Bioinformatics 31 (12), i303-i310, 2015	9	2015
Identifying transcription factors and microRNAs as key regulators of pathways using Bayesian inference on known pathway structures D Roqueiro, L Huang, Y Dai Proteome science 10 (1), 1-14, 2012	9	2012
CASMAP: detection of statistically significant combinations of SNPs in association mapping F Llinares-López, L Papaxanthos, D Roqueiro, D Bodenham, K Borgwardt Bioinformatics 35 (15), 2680-2682, 2019	8	2019
Multi-view Spectral Clustering on Conflicting Views X He, L Li, D Roqueiro, K Borgwardt Joint European Conference on Machine Learning and Knowledge Discovery in …, 2017	7	2017
Multiple-sensor indoor surveillance system computer and robot vision VA Petrushin, G Wei, O Shakil, D Roqueiro, V Gershman the 3rd Canadian Conference, 2006	6	2006

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