| Comprehensive molecular portraits of human breast tumours Brigham & Women’s Hospital & Harvard Medical School Chin Lynda 9 11 Park ... Nature 490 (7418), 61-70, 2012 | 11012 | 2012 |
| Comprehensive molecular characterization of human colon and rectal cancer Cancer Genome Atlas Network Nature 487 (7407), 330, 2012 | 7378 | 2012 |
| The cancer genome atlas pan-cancer analysis project JN Weinstein, EA Collisson, GB Mills, KR Shaw, BA Ozenberger, K Ellrott, ... Nature genetics 45 (10), 1113-1120, 2013 | 6397 | 2013 |
| The somatic genomic landscape of glioblastoma CW Brennan, RGW Verhaak, A McKenna, B Campos, H Noushmehr, ... cell 155 (2), 462-477, 2013 | 4903 | 2013 |
| Comprehensive genomic characterization of squamous cell lung cancers Cancer Genome Atlas Research Network Nature 489 (7417), 519, 2012 | 3641 | 2012 |
| Comprehensive molecular characterization of clear cell renal cell carcinoma Cancer Genome Atlas Research Network Analysis working group: Baylor College ... Nature 499 (7456), 43-49, 2013 | 2798 | 2013 |
| Pan-cancer analysis of whole genomes Nature 578 (7793), 82-93, 2020 | 1655* | 2020 |
| Scalable open science approach for mutation calling of tumor exomes using multiple genomic pipelines K Ellrott, MH Bailey, G Saksena, KR Covington, C Kandoth, C Stewart, ... Cell systems 6 (3), 271-281. e7, 2018 | 634 | 2018 |
| Combining tumor genome simulation with crowdsourcing to benchmark somatic single-nucleotide-variant detection AD Ewing, KE Houlahan, Y Hu, K Ellrott, C Caloian, TN Yamaguchi, ... Nature methods 12 (7), 623-630, 2015 | 317 | 2015 |
| Weinstein JN Cancer Genome Atlas Research Network Collisson EA, Mills GB, Shaw KRM, Ozenberger BA, Ellrott K., Shmulevich I …, 2013 | 227 | 2013 |
| The UCSC cancer genomics browser: update 2013 M Goldman, B Craft, T Swatloski, K Ellrott, M Cline, M Diekhans, S Ma, ... Nucleic acids research 41 (D1), D949-D954, 2013 | 196 | 2013 |
| A pan-cancer analysis reveals high-frequency genetic alterations in mediators of signaling by the TGF-β superfamily A Korkut, S Zaidi, RS Kanchi, S Rao, NR Gough, A Schultz, X Li, ... Cell systems 7 (4), 422-437. e7, 2018 | 143 | 2018 |
| Identifying transcription factor binding sites through Markov chain optimization K Ellrott, C Yang, FM Sladek, T Jiang Bioinformatics 18 (suppl_2), S100-S109, 2002 | 143 | 2002 |
| PROSPECT II: protein structure prediction program for genome‐scale applications D Kim, D Xu, J Guo, K Ellrott, Y Xu Protein engineering 16 (9), 641-650, 2003 | 138 | 2003 |
| GA4GH: International policies and standards for data sharing across genomic research and healthcare HL Rehm, AJH Page, L Smith, JB Adams, G Alterovitz, LJ Babb, ... Cell genomics 1 (2), 2021 | 130 | 2021 |
| Enabling transparent and collaborative computational analysis of 12 tumor types within The Cancer Genome Atlas L Omberg, K Ellrott, Y Yuan, C Kandoth, C Wong, MR Kellen, SH Friend, ... Nature genetics 45 (10), 1121-1126, 2013 | 130 | 2013 |
| A harmonized meta-knowledgebase of clinical interpretations of somatic genomic variants in cancer AH Wagner, B Walsh, G Mayfield, D Tamborero, D Sonkin, K Krysiak, ... Nature genetics 52 (4), 448-457, 2020 | 112 | 2020 |
| Inverting the model of genomics data sharing with the NHGRI Genomic Data Science Analysis, Visualization, and Informatics Lab-space MC Schatz, AA Philippakis, E Afgan, E Banks, VJ Carey, RJ Carroll, ... Cell Genomics 2 (1), 2022 | 86 | 2022 |
| Structure of the γ-D-glutamyl-L-diamino acid endopeptidase YkfC from Bacillus cereus in complex with L-Ala-γ-D-Glu: insights into substrate recognition by NlpC/P60 cysteine … Q Xu, P Abdubek, T Astakhova, HL Axelrod, C Bakolitsa, X Cai, D Carlton, ... Acta Crystallographica Section F: Structural Biology and Crystallization …, 2010 | 81 | 2010 |
| TumorMap: exploring the molecular similarities of cancer samples in an interactive portal Y Newton, AM Novak, T Swatloski, DC McColl, S Chopra, K Graim, ... Cancer research 77 (21), e111-e114, 2017 | 77 | 2017 |
Joshua M StuartUC Santa Cruz Genomics InstituteVerified email at ucsc.edu
