Fabian J Theis
Fabian J Theis
Verified email at helmholtz-muenchen.de - Homepage
Title
Cited by
Cited by
Year
SARS-CoV-2 entry factors are highly expressed in nasal epithelial cells together with innate immune genes
W Sungnak, N Huang, C Bécavin, M Berg, R Queen, M Litvinukova, ...
Nature medicine 26 (5), 681-687, 2020
9452020
Science forum: the human cell atlas
A Regev, SA Teichmann, ES Lander, I Amit, C Benoist, E Birney, ...
Elife 6, e27041, 2017
8422017
SCANPY: large-scale single-cell gene expression data analysis
FA Wolf, P Angerer, FJ Theis
Genome biology 19 (1), 1-5, 2018
8382018
Computational analysis of cell-to-cell heterogeneity in single-cell RNA-sequencing data reveals hidden subpopulations of cells
F Buettner, KN Natarajan, FP Casale, V Proserpio, A Scialdone, FJ Theis, ...
Nature biotechnology 33 (2), 155-160, 2015
8282015
SARS-CoV-2 receptor ACE2 is an interferon-stimulated gene in human airway epithelial cells and is detected in specific cell subsets across tissues
CGK Ziegler, SJ Allon, SK Nyquist, IM Mbano, VN Miao, CN Tzouanas, ...
Cell 181 (5), 1016-1035. e19, 2020
7932020
An atlas of genetic influences on human blood metabolites
SY Shin, EB Fauman, AK Petersen, J Krumsiek, R Santos, J Huang, ...
Nature genetics 46 (6), 543-550, 2014
6982014
Genome-wide association analyses identify 18 new loci associated with serum urate concentrations
A Köttgen, E Albrecht, A Teumer, V Vitart, J Krumsiek, C Hundertmark, ...
Nature genetics 45 (2), 145-154, 2013
5862013
Diffusion pseudotime robustly reconstructs lineage branching
L Haghverdi, M Büttner, FA Wolf, F Buettner, FJ Theis
Nature methods 13 (10), 845, 2016
5522016
Sparse component analysis and blind source separation of underdetermined mixtures
P Georgiev, F Theis, A Cichocki
IEEE Transactions on Neural Networks 16 (4), 993, 2005
4132005
Diffusion maps for high-dimensional single-cell analysis of differentiation data
L Haghverdi, F Buettner, FJ Theis
Bioinformatics 31 (18), 2989-2998, 2015
3852015
Hypergraphs and cellular networks
S Klamt, UU Haus, F Theis
PLoS Comput Biol 5 (5), e1000385, 2009
3672009
Combined single-cell functional and gene expression analysis resolves heterogeneity within stem cell populations
NK Wilson, DG Kent, F Buettner, M Shehata, IC Macaulay, ...
Cell stem cell 16 (6), 712-724, 2015
3342015
Current best practices in single‐cell RNA‐seq analysis: a tutorial
MD Luecken, FJ Theis
Molecular systems biology 15 (6), e8746, 2019
3222019
Discovery of sexual dimorphisms in metabolic and genetic biomarkers
K Mittelstrass, JS Ried, Z Yu, J Krumsiek, C Gieger, C Prehn, ...
PLoS Genet 7 (8), e1002215, 2011
3042011
MicroRNA loss enhances learning and memory in mice
W Konopka, A Kiryk, M Novak, M Herwerth, JR Parkitna, M Wawrzyniak, ...
Journal of Neuroscience 30 (44), 14835-14842, 2010
3032010
Live imaging of astrocyte responses to acute injury reveals selective juxtavascular proliferation
S Bardehle, M Krüger, F Buggenthin, J Schwausch, J Ninkovic, H Clevers, ...
Nature neuroscience 16 (5), 580-586, 2013
2982013
Decoding the regulatory network of early blood development from single-cell gene expression measurements
V Moignard, S Woodhouse, L Haghverdi, AJ Lilly, Y Tanaka, ...
Nature biotechnology 33 (3), 269-276, 2015
2942015
Characterization of transcriptional networks in blood stem and progenitor cells using high-throughput single-cell gene expression analysis
V Moignard, IC Macaulay, G Swiers, F Buettner, J Schütte, ...
Nature cell biology 15 (4), 363-372, 2013
2882013
Gaussian graphical modeling reconstructs pathway reactions from high-throughput metabolomics data
J Krumsiek, K Suhre, T Illig, J Adamski, FJ Theis
BMC systems biology 5 (1), 1-16, 2011
2672011
Deep learning: new computational modelling techniques for genomics
G Eraslan, Ž Avsec, J Gagneur, FJ Theis
Nature Reviews Genetics 20 (7), 389-403, 2019
2612019
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