Fabian J Theis
Fabian J Theis
Verified email at helmholtz-muenchen.de - Homepage
Title
Cited by
Cited by
Year
Computational analysis of cell-to-cell heterogeneity in single-cell RNA-sequencing data reveals hidden subpopulations of cells
F Buettner, KN Natarajan, FP Casale, V Proserpio, A Scialdone, FJ Theis, ...
Nature biotechnology 33 (2), 155-160, 2015
7812015
Science forum: the human cell atlas
A Regev, SA Teichmann, ES Lander, I Amit, C Benoist, E Birney, ...
Elife 6, e27041, 2017
7012017
An atlas of genetic influences on human blood metabolites
SY Shin, EB Fauman, AK Petersen, J Krumsiek, R Santos, J Huang, ...
Nature genetics 46 (6), 543-550, 2014
6482014
SCANPY: large-scale single-cell gene expression data analysis
FA Wolf, P Angerer, FJ Theis
Genome biology 19 (1), 15, 2018
6022018
Genome-wide association analyses identify 18 new loci associated with serum urate concentrations
A Köttgen, E Albrecht, A Teumer, V Vitart, J Krumsiek, C Hundertmark, ...
Nature genetics 45 (2), 145-154, 2013
5662013
SARS-CoV-2 entry factors are highly expressed in nasal epithelial cells together with innate immune genes
W Sungnak, N Huang, C Bécavin, M Berg, R Queen, M Litvinukova, ...
Nature medicine 26 (5), 681-687, 2020
5532020
Diffusion pseudotime robustly reconstructs lineage branching
L Haghverdi, M Büttner, FA Wolf, F Buettner, FJ Theis
Nature methods 13 (10), 845, 2016
4862016
SARS-CoV-2 receptor ACE2 is an interferon-stimulated gene in human airway epithelial cells and is detected in specific cell subsets across tissues
CGK Ziegler, SJ Allon, SK Nyquist, IM Mbano, VN Miao, CN Tzouanas, ...
Cell, 2020
4602020
Sparse component analysis and blind source separation of underdetermined mixtures
P Georgiev, F Theis, A Cichocki
IEEE Transactions on Neural Networks 16 (4), 993, 2005
3962005
Diffusion maps for high-dimensional single-cell analysis of differentiation data
L Haghverdi, F Buettner, FJ Theis
Bioinformatics 31 (18), 2989-2998, 2015
3542015
Hypergraphs and cellular networks
S Klamt, UU Haus, F Theis
PLoS Comput Biol 5 (5), e1000385, 2009
3402009
Combined single-cell functional and gene expression analysis resolves heterogeneity within stem cell populations
NK Wilson, DG Kent, F Buettner, M Shehata, IC Macaulay, ...
Cell stem cell 16 (6), 712-724, 2015
3132015
MicroRNA loss enhances learning and memory in mice
W Konopka, A Kiryk, M Novak, M Herwerth, JR Parkitna, M Wawrzyniak, ...
Journal of Neuroscience 30 (44), 14835-14842, 2010
2972010
Discovery of sexual dimorphisms in metabolic and genetic biomarkers
K Mittelstrass, JS Ried, Z Yu, J Krumsiek, C Gieger, C Prehn, ...
PLoS Genet 7 (8), e1002215, 2011
2902011
Decoding the regulatory network of early blood development from single-cell gene expression measurements
V Moignard, S Woodhouse, L Haghverdi, AJ Lilly, Y Tanaka, ...
Nature biotechnology 33 (3), 269-276, 2015
2822015
Characterization of transcriptional networks in blood stem and progenitor cells using high-throughput single-cell gene expression analysis
V Moignard, IC Macaulay, G Swiers, F Buettner, J Schütte, ...
Nature cell biology 15 (4), 363-372, 2013
2792013
Live imaging of astrocyte responses to acute injury reveals selective juxtavascular proliferation
S Bardehle, M Krüger, F Buggenthin, J Schwausch, J Ninkovic, H Clevers, ...
Nature neuroscience 16 (5), 580-586, 2013
2762013
Gaussian graphical modeling reconstructs pathway reactions from high-throughput metabolomics data
J Krumsiek, K Suhre, T Illig, J Adamski, FJ Theis
BMC systems biology 5 (1), 21, 2011
2612011
The dynamic range of the human metabolome revealed by challenges
S Krug, G Kastenmüller, F Stückler, MJ Rist, T Skurk, M Sailer, J Raffler, ...
The FASEB Journal 26 (6), 2607-2619, 2012
2572012
Lessons learned from quantitative dynamical modeling in systems biology
A Raue, M Schilling, J Bachmann, A Matteson, M Schelke, D Kaschek, ...
PloS one 8 (9), e74335, 2013
2432013
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