Samuel H Payne
Samuel H Payne
Associate Professor, Brigham Young University
Verified email at byu.edu
Title
Cited by
Cited by
Year
A multidimensional chromatography technology for in-depth phosphoproteome analysis
CP Albuquerque, MB Smolka, SH Payne, V Bafna, J Eng, H Zhou
Molecular & Cellular Proteomics 7 (7), 1389-1396, 2008
5072008
Integrated proteogenomic characterization of human high-grade serous ovarian cancer
H Zhang, T Liu, Z Zhang, SH Payne, B Zhang, JE McDermott, JY Zhou, ...
Cell 166 (3), 755-765, 2016
4432016
Discovery and revision of Arabidopsis genes by proteogenomics
NE Castellana, SH Payne, Z Shen, M Stanke, V Bafna, SP Briggs
Proceedings of the national academy of sciences 105 (52), 21034-21038, 2008
2762008
Population-based sample reveals gene–gender interactions in blood pressure in White Americans
BK Rana, PA Insel, SH Payne, K Abel, E Beutler, MG Ziegler, NJ Schork, ...
Hypertension 49 (1), 96-106, 2007
1252007
Retention and loss of amino acid biosynthetic pathways based on analysis of whole-genome sequences
SH Payne, WF Loomis
Eukaryotic cell 5 (2), 272-276, 2006
1142006
Proteogenomic analysis of human colon cancer reveals new therapeutic opportunities
S Vasaikar, C Huang, X Wang, VA Petyuk, SR Savage, B Wen, Y Dou, ...
Cell 177 (4), 1035-1049. e19, 2019
972019
The utility of protein and mRNA correlation
SH Payne
Trends in biochemical sciences 40 (1), 1-3, 2015
932015
Peptide-centric proteome analysis: an alternative strategy for the analysis of tandem mass spectrometry data
YS Ting, JD Egertson, SH Payne, S Kim, B MacLean, L Käll, R Aebersold, ...
Molecular & Cellular Proteomics 14 (9), 2301-2307, 2015
862015
An analysis of the sensitivity of proteogenomic mapping of somatic mutations and novel splicing events in cancer
KV Ruggles, Z Tang, X Wang, H Grover, M Askenazi, J Teubl, S Cao, ...
Molecular & Cellular Proteomics 15 (3), 1060-1071, 2016
772016
Methods, tools and current perspectives in proteogenomics
KV Ruggles, K Krug, X Wang, KR Clauser, J Wang, SH Payne, D Fenyö, ...
Molecular & Cellular Proteomics 16 (6), 959-981, 2017
742017
Systematic analysis of splice-site-creating mutations in cancer
RG Jayasinghe, S Cao, Q Gao, MC Wendl, NS Vo, SM Reynolds, Y Zhao, ...
Cell reports 23 (1), 270-281. e3, 2018
722018
PECAN: library-free peptide detection for data-independent acquisition tandem mass spectrometry data
YS Ting, JD Egertson, JG Bollinger, BC Searle, SH Payne, WS Noble, ...
Nature methods 14 (9), 903-908, 2017
702017
Proteogenomic analysis of bacteria and archaea: a 46 organism case study
E Venter, RD Smith, SH Payne
PloS one 6 (11), e27587, 2011
652011
Accurate annotation of peptide modifications through unrestrictive database search
S Tanner, SH Payne, S Dasari, Z Shen, PA Wilmarth, LL David, ...
Journal of proteome research 7 (01), 170-181, 2008
622008
A structural examination and collision cross section database for over 500 metabolites and xenobiotics using drift tube ion mobility spectrometry
X Zheng, NA Aly, Y Zhou, KT Dupuis, A Bilbao, VL Paurus, DJ Orton, ...
Chemical science 8 (11), 7724-7736, 2017
612017
The abundant marine bacterium Pelagibacter simultaneously catabolizes dimethylsulfoniopropionate to the gases dimethyl sulfide and methanethiol
J Sun, JD Todd, JC Thrash, Y Qian, MC Qian, B Temperton, J Guo, ...
Nature microbiology 1 (8), 1-5, 2016
602016
A proteogenomic update to Yersinia: enhancing genome annotation
SH Payne, ST Huang, R Pieper
BMC genomics 11 (1), 1-10, 2010
592010
Phosphorylation-specific MS/MS scoring for rapid and accurate phosphoproteome analysis
SH Payne, M Yau, MB Smolka, S Tanner, H Zhou, V Bafna
Journal of proteome research 7 (8), 3373-3381, 2008
572008
Proteogenomic strategies for identification of aberrant cancer peptides using large‐scale next‐generation sequencing data
S Woo, SW Cha, S Na, C Guest, T Liu, RD Smith, KD Rodland, S Payne, ...
Proteomics 14 (23-24), 2719-2730, 2014
552014
Informed-Proteomics: open-source software package for top-down proteomics
J Park, PD Piehowski, C Wilkins, M Zhou, J Mendoza, GM Fujimoto, ...
Nature methods 14 (9), 909-914, 2017
542017
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