Theodore J. Perkins
Theodore J. Perkins
Ottawa Hospital Research Institute
Verified email at - Homepage
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Strategies for cellular decision‐making
TJ Perkins, PS Swain
Molecular systems biology 5 (1), 326, 2009
Reverse engineering the gap gene network of Drosophila melanogaster
TJ Perkins, J Jaeger, J Reinitz, L Glass
PLoS computational biology 2 (5), e51, 2006
Lyapunov design for safe reinforcement learning
TJ Perkins, AG Barto
Journal of Machine Learning Research 3 (Dec), 803-832, 2002
A general model of codon bias due to GC mutational bias
GA Palidwor, TJ Perkins, X Xia
PloS one 5 (10), e13431, 2010
Transcriptional dominance of Pax7 in adult myogenesis is due to high-affinity recognition of homeodomain motifs
VD Soleimani, VG Punch, Y Kawabe, AE Jones, GA Palidwor, CJ Porter, ...
Developmental cell 22 (6), 1208-1220, 2012
Systematic Discovery of Rab GTPases with Synaptic Functions in Drosophila
CC Chan, S Scoggin, D Wang, S Cherry, T Dembo, B Greenberg, EJ Jin, ...
Current Biology 21 (20), 1704-1715, 2011
A convergent form of approximate policy iteration
TJ Perkins, D Precup
Advances in neural information processing systems, 1627-1634, 2003
Noisy information processing through transcriptional regulation
E Libby, TJ Perkins, PS Swain
Proceedings of the National Academy of Sciences 104 (17), 7151-7156, 2007
Inferring models of gene expression dynamics
TJ Perkins, M Hallett, L Glass
Journal of theoretical biology 230 (3), 289-299, 2004
A fluctuation method to quantify in vivo fluorescence data
N Rosenfeld, TJ Perkins, U Alon, MB Elowitz, PS Swain
Biophysical journal 91 (2), 759-766, 2006
UTX inhibition as selective epigenetic therapy against TAL1-driven T-cell acute lymphoblastic leukemia
A Benyoucef, CG Palii, C Wang, CJ Porter, A Chu, F Dai, V Tremblay, ...
Genes & development 30 (5), 508-521, 2016
Identifying regulatory subnetworks for a set of genes
MS Scott, T Perkins, S Bunnell, F Pepin, DY Thomas, M Hallett
Molecular & Cellular Proteomics 4 (5), 683-692, 2005
Control of glioblastoma tumorigenesis by feed-forward cytokine signaling
A Jahani-Asl, H Yin, VD Soleimani, T Haque, HA Luchman, NC Chang, ...
Nature neuroscience 19 (6), 798-806, 2016
Using Options for Knowledge Transfer in Reinforcement Learning
TJ Perkins, D Precup
University of Massachusetts, 1999
FiloDetect: automatic detection of filopodia from fluorescence microscopy images
S Nilufar, AA Morrow, JM Lee, TJ Perkins
BMC systems biology 7 (1), 1-12, 2013
Trichostatin A enhances vascular repair by injected human endothelial progenitors through increasing the expression of TAL1-dependent genes
CG Palii, B Vulesevic, S Fraineau, E Pranckeviciene, AJ Griffith, A Chu, ...
Cell Stem Cell 14 (5), 644-657, 2014
Estimating the stochastic bifurcation structure of cellular networks
C Song, H Phenix, V Abedi, M Scott, BP Ingalls, M Kærn, TJ Perkins
PLoS computational biology 6 (3), e1000699, 2010
Introduction to machine learning and bioinformatics
S Mitra, S Datta, T Perkins, G Michailidis
CRC Press, 2008
On the existence of fixed points for Q-learning and Sarsa in partially observable domains
TJ Perkins, MD Pendrith
ICML, 490-497, 2002
Learning instance-independent value functions to enhance local search
R Moll, A Barto, T Perkins, RS Sutton
Advances in Neural Information Processing Systems 11, 1017-1023, 1998
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