Joana Damas

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Denis M. LarkinReader in Comparative Genomics, University of LondonVerified email at rvc.ac.uk
Darren GriffinProfessor of Genetics, University of KentVerified email at kent.ac.uk
Marta Farre BelmonteLecturer in Molecular Biosciences, University of KentVerified email at kent.ac.uk
Harris LewinUC DavisVerified email at ucdavis.edu
Filipe PereiraPortugalVerified email at identificabio.com
Lucas KiazimUniversity of KentVerified email at kent.ac.uk
Antonio AmorimIPATIMUP, i3s, Faculty of Sciences University of PortoVerified email at ipatimup.pt
João CarneiroCIIMAR - Interdisciplinary Centre of Marine and Environmental ResearchVerified email at ciimar.up.pt
Diane P. GenereuxBioinformatics and Integrative Biology, UMass Medical School and Broad Institute of Harvard and MITVerified email at broadinstitute.org
Kathleen KeoughGladstone InstitutesVerified email at gladstone.ucsf.edu
Elinor K. KarlssonUniversity of Massachusetts Medical School & Broad InstituteVerified email at broadinstitute.org
David C. SamuelsAssociate Professor, Molecular Physiology and Biophysics, Vanderbilt University Medical CenterVerified email at vanderbilt.edu
Brett KaufmanUniversity of PitteburghVerified email at pitt.edu
Katherine S PollardDirector, Gladstone Institute of Data Science & Biotechnology / UCSFVerified email at gladstone.ucsf.edu
Andreas R PfenningAssistant Professor, Carnegie Mellon UniversityVerified email at cmu.edu
Ross SwoffordSenior Research Associate, Broad InstituteVerified email at broadinstitute.org
Emma TeelingProfessor (Molecular Zoology), University College DublinVerified email at ucd.ie
Michael HillerTranslational Biodiversity Center & Senckenberg FrankfurtVerified email at senckenberg.de
Klaus-Peter KoepfliSmithsonian-Mason School of ConservationVerified email at gmu.edu
Huabin ZhaoWuhan UniversityVerified email at whu.edu.cn

Joana Damas

Postdoctoral Research Associate @ UC Davis Genome Center

Verified email at ucdavis.edu - Homepage

Biology Evolution Genetics Bioinformatics Forensics Genomics


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Broad host range of SARS-CoV-2 predicted by comparative and structural analysis of ACE2 in vertebrates. bioRxiv 2020.04. 16.045302 J Damas, GM Hughes, KC Keough, CA Painter, NS Persky, M Corbo, ... DOI 10 (2020.04), 16.045302, 2020	194*	2020
Towards complete and error-free genome assemblies of all vertebrate species A Rhie, SA McCarthy, O Fedrigo, J Damas, G Formenti, S Koren, ... Nature 592 (7856), 737-746, 2021	87	2021
Association of G-quadruplex forming sequences with human mtDNA deletion breakpoints DW Dong, F Pereira, SP Barrett, JE Kolesar, K Cao, J Damas, ... BMC genomics 15 (1), 1-15, 2014	76	2014
Upgrading short-read animal genome assemblies to chromosome level using comparative genomics and a universal probe set J Damas, R O'Connor, M Farré, VPE Lenis, HJ Martell, A Mandawala, ... Genome research 27 (5), 875-884, 2017	70	2017
Third report on chicken genes and chromosomes 2015 M Schmid, J Smith, DW Burt, BL Aken, PB Antin, AL Archibald, C Ashwell, ... Cytogenetic and genome research 145 (2), 78-179, 2015	68	2015
Mitochondrial DNA rearrangements in health and disease—a comprehensive study J Damas, DC Samuels, J Carneiro, A Amorim, F Pereira Human mutation 35 (1), 1-14, 2014	67	2014
Mitochondrial DNA deletions are associated with non-B DNA conformations J Damas, J Carneiro, J Goncalves, JB Stewart, DC Samuels, A Amorim, ... Nucleic acids research 40 (16), 7606-7621, 2012	63	2012
Chromosome segregation is biased by kinetochore size D Drpic, AC Almeida, P Aguiar, F Renda, J Damas, HA Lewin, DM Larkin, ... Current Biology 28 (9), 1344-1356. e5, 2018	47	2018
Digital PCR methods improve detection sensitivity and measurement precision of low abundance mtDNA deletions FR Belmonte, JL Martin, K Frescura, J Damas, F Pereira, MA Tarnopolsky, ... Scientific reports 6 (1), 1-11, 2016	44	2016
Novel insights into chromosome evolution in birds, archosaurs, and reptiles M Farre, J Narayan, GT Slavov, J Damas, L Auvil, C Li, ED Jarvis, DW Burt, ... Genome biology and evolution 8 (8), 2442-2451, 2016	42	2016
MitoBreak: the mitochondrial DNA breakpoints database J Damas, J Carneiro, A Amorim, F Pereira Nucleic acids research 42 (D1), D1261-D1268, 2014	42	2014
Chromosome-level assembly reveals extensive rearrangement in saker falcon and budgerigar, but not ostrich, genomes RE O’Connor, M Farré, S Joseph, J Damas, L Kiazim, R Jennings, ... Genome biology 19 (1), 1-15, 2018	40	2018
Reconstruction of the diapsid ancestral genome permits chromosome evolution tracing in avian and non-avian dinosaurs RE O’Connor, MN Romanov, LG Kiazim, PM Barrett, M Farré, J Damas, ... Nature communications 9 (1), 1-9, 2018	36	2018
A comparative genomics multitool for scientific discovery and conservation Zoonomia Consortium Nature 587 (7833), 240, 2020	26	2020
Reconstruction of avian ancestral karyotypes reveals differences in the evolutionary history of macro-and microchromosomes J Damas, J Kim, M Farré, DK Griffin, DM Larkin Genome biology 19 (1), 1-16, 2018	17	2018
Platypus and echidna genomes reveal mammalian biology and evolution Y Zhou, L Shearwin-Whyatt, J Li, Z Song, T Hayakawa, D Stevens, ... Nature 592 (7856), 756-762, 2021	11	2021
Avian chromosomal evolution J Damas, RE O’Connor, DK Griffin, DM Larkin Avian Genomics in Ecology and Evolution, 69-92, 2019	9	2019
Splice-Break: exploiting an RNA-seq splice junction algorithm to discover mitochondrial DNA deletion breakpoints and analyses of psychiatric disorders BE Hjelm, B Rollins, L Morgan, A Sequeira, F Mamdani, F Pereira, ... Nucleic acids research 47 (10), e59-e59, 2019	7	2019
A near-chromosome-scale genome assembly of the gemsbok (Oryx gazella): an iconic antelope of the Kalahari desert M Farré, Q Li, Y Zhou, J Damas, LG Chemnick, J Kim, OA Ryder, J Ma, ... Gigascience 8 (2), giy162, 2019	6	2019
An integrated chromosome-scale genome assembly of the Masai giraffe (Giraffa camelopardalis tippelskirchi) M Farré, Q Li, I Darolti, Y Zhou, J Damas, AA Proskuryakova, ... GigaScience 8 (8), giz090, 2019	4	2019

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