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Kosuke Fujishima
Kosuke Fujishima
Earth-Life Science Institute, Tokyo Institute of Technology
Verified email at elsi.jp
Title
Cited by
Cited by
Year
tRNA gene diversity in the three domains of life
K Fujishima, A Kanai
Frontiers in genetics 5, 93485, 2014
1012014
Tri-split tRNA is a transfer RNA made from 3 transcripts that provides insight into the evolution of fragmented tRNAs in archaea
K Fujishima, J Sugahara, K Kikuta, R Hirano, A Sato, M Tomita, A Kanai
Proceedings of the National Academy of Sciences 106 (8), 2683-2687, 2009
992009
Comprehensive analysis of archaeal tRNA genes reveals rapid increase of tRNA introns in the order thermoproteales
J Sugahara, K Kikuta, K Fujishima, N Yachie, M Tomita, A Kanai
Molecular biology and evolution 25 (12), 2709-2716, 2008
762008
Extremely high UV-C radiation resistant microorganisms from desert environments with different manganese concentrations
IG Paulino-Lima, K Fujishima, JU Navarrete, D Galante, F Rodrigues, ...
Journal of Photochemistry and Photobiology B: Biology 163, 327-336, 2016
542016
Sequence evidence in the archaeal genomes that tRNAs emerged through the combination of ancestral genes as 5′ and 3′ tRNA halves
K Fujishima, J Sugahara, M Tomita, A Kanai
PLoS One 3 (2), e1622, 2008
522008
Computational prediction and experimental validation of evolutionarily conserved microRNA target genes in bilaterian animals
K Takane, K Fujishima, Y Watanabe, A Sato, N Saito, M Tomita, A Kanai
BMC genomics 11, 1-13, 2010
462010
Disrupted tRNA gene diversity and possible evolutionary scenarios
J Sugahara, K Fujishima, K Morita, M Tomita, A Kanai
Journal of molecular evolution 69, 497-504, 2009
412009
Earth analogues for past and future life on Mars: isolation of perchlorate resistant halophiles from Big Soda Lake
T Matsubara, K Fujishima, CW Saltikov, S Nakamura, LJ Rothschild
International Journal of Astrobiology 16 (3), 218-228, 2017
392017
Peptides before and during the nucleotide world: An origins story emphasizing cooperation between proteins and nucleic acids
SD Fried, K Fujishima, M Makarov, I Cherepashuk, K Hlouchova
Journal of the Royal Society Interface 19 (187), 20210641, 2022
372022
Origin of the Reductive Tricarboxylic Acid (rTCA) Cycle-Type CO2 Fixation: A Perspective
N Kitadai, M Kameya, K Fujishima
Life 7 (4), 39, 2017
362017
A novel three-unit tRNA splicing endonuclease found in ultrasmall Archaea possesses broad substrate specificity
K Fujishima, J Sugahara, CS Miller, BJ Baker, M Di Giulio, K Takesue, ...
Nucleic acids research 39 (22), 9695-9704, 2011
352011
Large-scale tRNA intron transposition in the archaeal order Thermoproteales represents a novel mechanism of intron gain
K Fujishima, J Sugahara, M Tomita, A Kanai
Molecular biology and evolution 27 (10), 2233-2243, 2010
332010
Construction and characterization of metal ion-containing DNA nanowires for synthetic biology and nanotechnology
S Vecchioni, MC Capece, E Toomey, L Nguyen, A Ray, A Greenberg, ...
Scientific reports 9 (1), 6942, 2019
302019
Identification, expression, and molecular evolution of microRNAs in the “living fossil” Triops cancriformis (tadpole shrimp)
KT Ikeda, Y Hirose, K Hiraoka, E Noro, K Fujishima, M Tomita, A Kanai
RNA 21 (2), 230-242, 2015
302015
Proteome-wide prediction of novel DNA/RNA-binding proteins using amino acid composition and periodicity in the hyperthermophilic archaeon Pyrococcus furiosus
K Fujishima, M Komasa, S Kitamura, H Suzuki, M Tomita, A Kanai
DNA research 14 (3), 91-102, 2007
292007
Metatranscriptomic analysis of microbes in an Oceanfront deep-subsurface hot spring reveals novel small RNAs and type-specific tRNA degradation
S Murakami, K Fujishima, M Tomita, A Kanai
Applied and environmental microbiology 78 (4), 1015-1022, 2012
282012
Peptide synthesis under the alkaline hydrothermal conditions on Enceladus
W Takahagi, K Seo, T Shibuya, Y Takano, K Fujishima, M Saitoh, ...
ACS Earth and Space Chemistry 3 (11), 2559-2568, 2019
252019
X-ray structure of the fourth type of archaeal tRNA splicing endonuclease: insights into the evolution of a novel three-unit composition and a unique loop involved in broad …
A Hirata, K Fujishima, R Yamagami, T Kawamura, JF Banfield, A Kanai, ...
Nucleic acids research 40 (20), 10554-10566, 2012
242012
A bifunctional polyphosphate kinase driving the regeneration of nucleoside triphosphate and reconstituted cell-free protein synthesis
PH Wang, K Fujishima, S Berhanu, Y Kuruma, TZ Jia, AN Khusnutdinova, ...
ACS Synthetic Biology 9 (1), 36-42, 2019
23*2019
A new approach to biomining: bioengineering surfaces for metal recovery from aqueous solutions
J Urbina, A Patil, K Fujishima, IG Paulino-Lima, C Saltikov, LJ Rothschild
Scientific Reports 9 (1), 16422, 2019
202019
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