Sven Thiele

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Torsten SchaubUniversity of PotsdamVerified email at cs.uni-potsdam.de
Martin GebserUniversity of Klagenfurt / Graz University of TechnologyVerified email at aau.at
Anne SiegelResearch Director, CNRS, IRISA (Rennes, France)Verified email at irisa.fr
Roland KaminskiUniversity of PotsdamVerified email at cs.uni-potsdam.de
Julio Saez RodriguezHeidelberg UniversityVerified email at uni-heidelberg.de
Damien EveillardNantes Université, Centrale Nantes, CNRS, LS2N, Université de NantesVerified email at univ-nantes.fr
Federica EduatiTechnische Universiteit EindhovenVerified email at tue.nl
Carito GuziołowskiAssociate professor of Computer Science, IRCCyN, École Centrale de NantesVerified email at irccyn.ec-nantes.fr
Steffen KlamtMax Planck Institute for Dynamics of Complex Technical Systems, MagdeburgVerified email at mpi-magdeburg.mpg.de
sylvain prigentUMR 1332, Biologie des Fruits et Pathologies, INRAEVerified email at inrae.fr
Tomi JanhunenTampere University, FinlandVerified email at tuni.fi
Thomas CokelaerInstitut PasteurVerified email at pasteur.fr
Thierry TononCentre for Novel Agricultural Products, Department of Biology, University of YorkVerified email at york.ac.uk
Simon DittamiStation Biologique de RoscoffVerified email at sb-roscoff.fr
Robert E MercerProfessor of Computer Science, The University of Western OntarioVerified email at csd.uwo.ca
Marius LindauerLeibniz University Hannover (Germany), Institute of Artificial Intelligence LUH|AI, L3S ResearchVerified email at ai.uni-hannover.de
Clémence FriouxInria, Univ. Bordeaux, INRAE, 33400 Talence, FranceVerified email at inria.fr
Abdelhalim LarhlimiUniversité de Nantes - LS2N - CombiVerified email at univ-nantes.fr
Jérémie BourdonFull Professor, Université de NantesVerified email at univ-nantes.fr
Oliver HädickeMax Planck Institute for Dynamics of complex technical SystemsVerified email at mpi-magdeburg.mpg.de

Sven Thiele

Potassco Solutions GmbH

Verified email at potassco.com - Homepage

Logic Programming Answer Set Programming Computational biology Metabolic Networks Gene


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Gringo: A New Grounder for Answer Set Programming M Gebser, T Schaub, S Thiele Logic Programming and Nonmonotonic Reasoning 9th International Conference …, 2007	267	2007
Engineering an Incremental ASP Solver M Gebser, R Kaminski, B Kaufmann, M Ostrowski, T Schaub, S Thiele Logic Programming 24th International Conference, 190-205, 2008	171	2008
A User’s Guide to gringo, clasp, clingo, and iclingo M Gebser, R Kaminski, B Kaufmann, M Ostrowski, T Schaub, S Thiele	159	2008
Detecting inconsistencies in large biological networks with answer set programming M Gebser, T Schaub, S Thiele, P Veber Theory and Practice of Logic Programming 11 (Special Issue 2-3), 323-360, 2011	157	2011
Repair and Prediction (Under Inconsistency) in Large Biological Networks with Answer Set Programming M Gebser, C Guziolowski, M Ivanchev, T Schaub, A Siegel, S Thiele, ... Twelfth International Conference on the Principles of Knowledge …, 2010	104	2010
Meneco, a Topology-Based Gap-Filling Tool Applicable to Degraded Genome-Wide Metabolic Networks S Prigent, C Frioux, SM Dittami, S Thiele, A Larhlimi, G Collet, F Gutknecht, ... PLOS Computational Biology 13 (1), e1005276, 2017	101	2017
Potassco User Guide M Gebser, R Kaminski, B Kaufmann, M Lindauer, M Ostrowski, J Romero, ... Institute for Informatics, University of Potsdam, second edition edition, 2015	101*	2015
Use of CellNetAnalyzer in biotechnology and metabolic engineering A von Kamp, S Thiele, O Hädicke, S Klamt Journal of biotechnology 261, 221-228, 2017	99	2017
Exhaustively characterizing feasible logic models of a signaling network using Answer Set Programming C Guziolowski, S Videla, F Eduati, S Thiele, T Cokelaer, A Siegel, ... Bioinformatics 29 (18), 2320-2326, 2013	95	2013
Metabolic Network Expansion with Answer Set Programming T Schaub, S Thiele Logic Programming 25th International Conference, 312-326, 2009	66	2009
On the Input Language of ASP Grounder Gringo M Gebser, R Kaminski, M Ostrowski, T Schaub, S Thiele Logic Programming and Nonmonotonic Reasoning 10th International Conference …, 2009	50	2009
The genome-scale metabolic network of Ectocarpus siliculosus (EctoGEM): a resource to study brown algal physiology and beyond S Prigent, G Collet, SM Dittami, L Delage, F de Corny, O Dameron, ... The Plant Journal, 2014	47	2014
Platypus: A Platform for Distributed Answer Set Solving J Gressmann, T Janhunen, RE Mercer, T Schaub, S Thiele, R Tichy Logic Programming and Nonmonotonic Reasoning 8th International Conference …, 2005	47	2005
Learning Boolean logic models of signaling networks with ASP S Videla, C Guziolowski, F Eduati, S Thiele, M Gebser, J Nicolas, ... Theoretical Computer Science, 2014	43	2014
The BioASP Library: ASP Solutions for Systems Biology M Gebser, A Konig, T Schaub, S Thiele, P Veber Tools with Artificial Intelligence (ICTAI), 2010 22nd IEEE International …, 2010	35	2010
Revisiting the Training of Logic Models of Protein Signaling Networks with ASP S Videla, C Guziolowski, F Eduati, S Thiele, N Grabe, J Saez-Rodriguez, ... Computational Methods in Systems Biology 10th International Conference, 342-361, 2012	31	2012
Extending the Metabolic Network of Ectocarpus Siliculosus using Answer Set Programming G Collet, D Eveillard, M Gebser, S Prigent, T Schaub, A Siegel, S Thiele Logic Programming and Nonmonotonic Reasoning 12th International Conference …, 2013	26	2013
COBA 2.0: A Consistency-Based Belief Change System JP Delgrande, DH Liu, T Schaub, S Thiele Symbolic and Quantitative Approaches to Reasoning with Uncertainty 9th …, 2007	21	2007
CNApy: a CellNetAnalyzer GUI in Python for analyzing and designing metabolic networks S Thiele, A von Kamp, PS Bekiaris, P Schneider, S Klamt Bioinformatics 38 (5), 1467-1469, 2022	20	2022
Extended notions of sign consistency to relate experimental data to signaling and regulatory network topologies S Thiele, L Cerone, J Saez-Rodriguez, A Siegel, C Guziołowski, S Klamt BMC Bioinformatics 16, 2015	19	2015

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