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Marc A. Suchard
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MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space
F Ronquist, M Teslenko, P Van Der Mark, DL Ayres, A Darling, S Höhna, ...
Systematic biology 61 (3), 539-542, 2012
259092012
Tracer v1.6 http://beast.community
A Rambaut, MA Suchard, D Xie, AJ Drummond
13825*2015
Bayesian phylogenetics with BEAUti and the BEAST 1.7
AJ Drummond, MA Suchard, D Xie, A Rambaut
Molecular biology and evolution 29 (8), 1969-1973, 2012
109042012
Posterior summarization in Bayesian phylogenetics using Tracer 1.7
A Rambaut, AJ Drummond, D Xie, G Baele, MA Suchard
Systematic biology 67 (5), 901-904, 2018
86042018
BEAST 2: a software platform for Bayesian evolutionary analysis
R Bouckaert, J Heled, D Kühnert, T Vaughan, CH Wu, D Xie, MA Suchard, ...
PLoS computational biology 10 (4), e1003537, 2014
64632014
BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis
R Bouckaert, TG Vaughan, J Barido-Sottani, S Duchêne, M Fourment, ...
PLoS computational biology 15 (4), e1006650, 2019
32172019
Bayesian phylogenetic and phylodynamic data integration using BEAST 1.10
MA Suchard, P Lemey, G Baele, DL Ayres, AJ Drummond, A Rambaut
Virus Evolution 4 (1), vey016, 2018
31302018
Bayesian phylogeography finds its roots
P Lemey, A Rambaut, AJ Drummond, MA Suchard
PLoS computational biology 5 (9), e1000520, 2009
18442009
Genomics and epidemiology of the P. 1 SARS-CoV-2 lineage in Manaus, Brazil
NR Faria, TA Mellan, C Whittaker, IM Claro, DS Candido, S Mishra, ...
Science 372 (6544), 815-821, 2021
16242021
Observational Health Data Sciences and Informatics (OHDSI): opportunities for observational researchers
G Hripcsak, JD Duke, NH Shah, CG Reich, V Huser, MJ Schuemie, ...
MEDINFO 2015: eHealth-enabled Health, 574-578, 2015
12072015
Improving the accuracy of demographic and molecular clock model comparison while accommodating phylogenetic uncertainty
G Baele, P Lemey, T Bedford, A Rambaut, MA Suchard, AV Alekseyenko
Molecular biology and evolution 29 (9), 2157-2167, 2012
11552012
The early spread and epidemic ignition of HIV-1 in human populations
NR Faria, A Rambaut, MA Suchard, G Baele, T Bedford, MJ Ward, ...
Science 346 (6205), 56-61, 2014
10062014
COVID-19: epidemiology, evolution, and cross-disciplinary perspectives
J Sun, WT He, L Wang, A Lai, X Ji, X Zhai, G Li, MA Suchard, J Tian, ...
Trends in molecular medicine 26 (5), 483-495, 2020
9342020
Bayesian selection of continuous-time Markov chain evolutionary models
MA Suchard, RE Weiss, JS Sinsheimer
Molecular biology and evolution 18 (6), 1001-1013, 2001
9092001
A physical map of 30,000 human genes
P Deloukas, GD Schuler, G Gyapay, EM Beasley, C Soderlund, ...
Science 282 (5389), 744-746, 1998
8361998
Mapping the origins and expansion of the Indo-European language family
R Bouckaert, P Lemey, M Dunn, SJ Greenhill, AV Alekseyenko, ...
Science 337 (6097), 957-960, 2012
8292012
Species-specific responses of Late Quaternary megafauna to climate and humans
ED Lorenzen, D Nogués-Bravo, L Orlando, J Weinstock, J Binladen, ...
Nature 479 (7373), 359-364, 2011
7932011
Smooth skyride through a rough skyline: Bayesian coalescent-based inference of population dynamics
VN Minin, EW Bloomquist, MA Suchard
Molecular biology and evolution 25 (7), 1459-1471, 2008
7552008
Phylogeography takes a relaxed random walk in continuous space and time
P Lemey, A Rambaut, JJ Welch, MA Suchard
Molecular biology and evolution 27 (8), 1877-1885, 2010
7522010
BEAGLE: an application programming interface and high-performance computing library for statistical phylogenetics
DL Ayres, A Darling, DJ Zwickl, P Beerli, MT Holder, PO Lewis, ...
Systematic biology 61 (1), 170-173, 2012
6892012
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