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Russell S Thomas
Russell S Thomas
Director, Center for Computational Toxicology and Exposure, U.S. Environmental Protection Agency
Verified email at epa.gov
Title
Cited by
Cited by
Year
The MicroArray Quality Control (MAQC)-II study of common practices for the development and validation of microarray-based predictive models
Nature biotechnology 28 (8), 827-838, 2010
8452010
ToxCast chemical landscape: paving the road to 21st century toxicology
AM Richard, RS Judson, KA Houck, CM Grulke, P Volarath, ...
Chemical research in toxicology 29 (8), 1225-1251, 2016
5672016
Portosystemic shunting and persistent fetal vascular structures in aryl hydrocarbon receptor-deficient mice
GP Lahvis, SL Lindell, RS Thomas, RS McCuskey, C Murphy, E Glover, ...
Proceedings of the National Academy of Sciences 97 (19), 10442-10447, 2000
4712000
Integration of dosimetry, exposure, and high-throughput screening data in chemical toxicity assessment
BA Wetmore, JF Wambaugh, SS Ferguson, MA Sochaski, DM Rotroff, ...
Toxicological Sciences 125 (1), 157-174, 2012
4542012
A comparison of batch effect removal methods for enhancement of prediction performance using MAQC-II microarray gene expression data
J Luo, M Schumacher, A Scherer, D Sanoudou, D Megherbi, T Davison, ...
The pharmacogenomics journal 10 (4), 278-291, 2010
3502010
Incorporating Human Dosimetry and Exposure into High-Throughput In Vitro Toxicity Screening
DM Rotroff, BA Wetmore, DJ Dix, SS Ferguson, HJ Clewell, KA Houck, ...
Toxicological Sciences 117 (2), 348-358, 2010
2992010
Identification of toxicologically predictive gene sets using cDNA microarrays
RS Thomas, DR Rank, SG Penn, GM Zastrow, KR Hayes, K Pande, ...
Molecular Pharmacology 60 (6), 1189-1194, 2001
2952001
Integrated Model of Chemical Perturbations of a Biological Pathway Using 18 In Vitro High-Throughput Screening Assays for the Estrogen Receptor
RS Judson, FM Magpantay, V Chickarmane, C Haskell, N Tania, J Taylor, ...
Toxicological Sciences 148 (1), 137-154, 2015
2832015
Incorporating High-Throughput Exposure Predictions With Dosimetry-Adjusted In Vitro Bioactivity to Inform Chemical Toxicity Testing
BA Wetmore, JF Wambaugh, B Allen, SS Ferguson, MA Sochaski, ...
Toxicological Sciences 148 (1), 121-136, 2015
2792015
Incorporating new technologies into toxicity testing and risk assessment: moving from 21st century vision to a data-driven framework
RS Thomas, MA Philbert, SS Auerbach, BA Wetmore, MJ Devito, I Cote, ...
toxicological sciences 136 (1), 4-18, 2013
2552013
Editor's Highlight: Analysis of the Effects of Cell Stress and Cytotoxicity on In Vitro Assay Activity Across a Diverse Chemical and Assay Space
R Judson, K Houck, M Martin, AM Richard, TB Knudsen, I Shah, S Little, ...
Toxicological Sciences 152 (2), 323-339, 2016
2512016
Screening chemicals for estrogen receptor bioactivity using a computational model
P Browne, RS Judson, WM Casey, NC Kleinstreuer, RS Thomas
Environmental science & technology 49 (14), 8804-8814, 2015
2512015
The next generation blueprint of computational toxicology at the US Environmental Protection Agency
RS Thomas, T Bahadori, TJ Buckley, J Cowden, C Deisenroth, ...
Toxicological Sciences 169 (2), 317-332, 2019
2402019
Toxicity testing in the 21st century: progress in the past decade and future perspectives
D Krewski, ME Andersen, MG Tyshenko, K Krishnan, T Hartung, ...
Archives of toxicology 94, 1-58, 2020
2362020
Estimating toxicity-related biological pathway altering doses for high-throughput chemical risk assessment
RS Judson, RJ Kavlock, RW Setzer, EA Cohen Hubal, MT Martin, ...
Chemical research in toxicology 24 (4), 451-462, 2011
2242011
A method to integrate benchmark dose estimates with genomic data to assess the functional effects of chemical exposure
RS Thomas, BC Allen, A Nong, L Yang, E Bermudez, HJ Clewell III, ...
Toxicological sciences 98 (1), 240-248, 2007
2002007
BMDExpress: a software tool for the benchmark dose analyses of genomic data
L Yang, BC Allen, RS Thomas
BMC genomics 8, 1-8, 2007
1952007
IVT-seq reveals extreme bias in RNA sequencing
NF Lahens, IH Kavakli, R Zhang, K Hayer, MB Black, H Dueck, A Pizarro, ...
Genome biology 15, 1-15, 2014
1872014
The US Federal Tox21 Program: A strategic and operational plan for continued leadership
RS Thomas, RS Paules, A Simeonov, SC Fitzpatrick, KM Crofton, ...
Altex 35 (2), 163, 2018
1852018
Temporal concordance between apical and transcriptional points of departure for chemical risk assessment
RS Thomas, SC Wesselkamper, NCY Wang, QJ Zhao, DD Petersen, ...
Toxicological Sciences 134 (1), 180-194, 2013
1852013
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