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Thuy Diem Nguyen
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SparseHC: a memory-efficient online hierarchical clustering algorithm
TD Nguyen, B Schmidt, CK Kwoh
Procedia Computer Science 29, 8-19, 2014
342014
Efficient agglomerative hierarchical clustering for biological sequence analysis
TD Nguyen, CK Kwoh
TENCON 2015-2015 IEEE Region 10 Conference, 1-3, 2015
92015
CRiSPy-CUDA: Computing Species Richness in 16S rRNA Pyrosequencing Datasets with CUDA
Z Zheng, TD Nguyen, B Schmidt
Pattern Recognition in Bioinformatics, 37-49, 2011
82011
Efficient and accurate OTU clustering with GPU-based sequence alignment and dynamic dendrogram cutting
TD Nguyen, B Schmidt, Z Zheng, CK Kwoh
IEEE/ACM Transactions on Computational Biology and Bioinformatics 12 (5 …, 2015
72015
Fast dendrogram-based OTU clustering using sequence embedding
TD Nguyen, B Schmidt, CK Kwoh
Proceedings of the 5th ACM Conference on Bioinformatics, Computational …, 2014
42014
IFACEwat: the interfacial water-implemented re-ranking algorithm to improve the discrimination of near native structures for protein rigid docking
CTT Su, TD Nguyen, J Zheng, CK Kwoh
BMC bioinformatics 15, 1-15, 2014
22014
Large‐Scale Clustering of Short Reads for Metagenomics On GPUs
TD Nguyen, B Schmidt, Z Zheng, CK Kwoh
Biological Knowledge Discovery Handbook, 1003-1022, 2013
12013
Oral cancer derived tumor necrosis factor alpha (TNF alpha) activates Schwann cells to amplify pain
E Salvo, T Nguyen, N Scheff, B Schmidt, D Albertson, J Dolan, Y Ye
GLIA 67, E323-E324, 2019
2019
Context Expansion Using Wikipedia, TF-IDF Scores and Stemming
T Lindeberg, T Nguyen, A Spång, A Nilsson, S Purmonen
Big Data meets Computational Science, preface for ICCS 2014........................... 1 David Abramson, Michael Lees, Valeria Krzhizhanovskaya, Jack Dongarra and Peter MA …
TD Nguyen, B Schmidt, CK Kwoh, JMC Lozano, D Gimenez, G Bernabé, ...
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Articles 1–10