Vikas Nanda
Vikas Nanda
Professor of Biochemistry, Robert Wood Johnson Medical School
Verified email at cabm.rutgers.edu
Title
Cited by
Cited by
Year
Structural basis for the function and inhibition of an influenza virus proton channel
AL Stouffer, R Acharya, D Salom, AS Levine, L Di Costanzo, CS Soto, ...
Nature 451 (7178), 596-599, 2008
5902008
Designing artificial enzymes by intuition and computation
V Nanda, RL Koder
Nature chemistry 2 (1), 15, 2010
2082010
Dimerization of the transmembrane domain of integrin αIIb subunit in cell membranes
R Li, R Gorelik, V Nanda, PB Law, JD Lear, WF DeGrado, JS Bennett
Journal of Biological Chemistry 279 (25), 26666-26673, 2004
1752004
Computational de novo design and characterization of a four-helix bundle protein that selectively binds a nonbiological cofactor
FV Cochran, SP Wu, W Wang, V Nanda, JG Saven, MJ Therien, ...
Journal of the American Chemical Society 127 (5), 1346-1347, 2005
1692005
A push-pull mechanism for regulating integrin function
W Li, DG Metcalf, R Gorelik, R Li, N Mitra, V Nanda, PB Law, JD Lear, ...
Proceedings of the National Academy of Sciences 102 (5), 1424-1429, 2005
1432005
Ez, a depth-dependent potential for assessing the energies of insertion of amino acid side-chains into membranes: derivation and applications to determining the orientation of …
A Senes, DC Chadi, PB Law, RFS Walters, V Nanda, WF DeGrado
Journal of molecular biology 366 (2), 436-448, 2007
1342007
De novo design of a redox-active minimal rubredoxin mimic
V Nanda, MM Rosenblatt, A Osyczka, H Kono, Z Getahun, PL Dutton, ...
Journal of the American Chemical Society 127 (16), 5804-5805, 2005
1202005
A new method for determining the local environment and orientation of individual side chains of membrane-binding peptides
MJ Tucker, Z Getahun, V Nanda, WF DeGrado, F Gai
Journal of the American Chemical Society 126 (16), 5078-5079, 2004
1122004
Empirical lipid propensities of amino acid residues in multispan alpha helical membrane proteins
L Adamian, V Nanda, WF DeGrado, J Liang
Proteins: Structure, Function, and Bioinformatics 59 (3), 496-509, 2005
1042005
Aromatic interactions promote self-association of collagen triple-helical peptides to higher-order structures
K Kar, S Ibrar, V Nanda, TM Getz, SP Kunapuli, B Brodsky
Biochemistry 48 (33), 7959-7968, 2009
982009
The conformation of the pore region of the M2 proton channel depends on lipid bilayer environment
KC Duong‐Ly, V Nanda, WF DeGrado, KP Howard
Protein science 14 (4), 856-861, 2005
952005
Sequence determinants of a transmembrane proton channel: an inverse relationship between stability and function
AL Stouffer, V Nanda, JD Lear, WF DeGrado
Journal of molecular biology 347 (1), 169-179, 2005
662005
Aromatic interactions in homeodomains contribute to the low quantum yield of a conserved, buried tryptophan
V Nanda, L Brand
Proteins: Structure, Function, and Bioinformatics 40 (1), 112-125, 2000
602000
Using α-helical coiled-coils to design nanostructured metalloporphyrin arrays
KA McAllister, H Zou, FV Cochran, GM Bender, A Senes, HC Fry, V Nanda, ...
Journal of the American Chemical Society 130 (36), 11921-11927, 2008
542008
De novo design of a non-natural fold for an iron–sulfur protein: Alpha-helical coiled-coil with a four-iron four-sulfur cluster binding site in its central core
J Grzyb, F Xu, L Weiner, EJ Reijerse, W Lubitz, V Nanda, D Noy
Biochimica et Biophysica Acta (BBA)-Bioenergetics 1797 (3), 406-413, 2010
522010
Association of a model transmembrane peptide containing gly in a heptad sequence motif
JD Lear, AL Stouffer, H Gratkowski, V Nanda, WF DeGrado
Biophysical journal 87 (5), 3421-3429, 2004
472004
Computational design of a collagen A: B: C-type heterotrimer
F Xu, S Zahid, T Silva, V Nanda
Journal of the American Chemical Society 133 (39), 15260-15263, 2011
402011
Compositional control of higher order assembly using synthetic collagen peptides
F Xu, J Li, V Jain, RS Tu, Q Huang, V Nanda
Journal of the American Chemical Society 134 (1), 47-50, 2012
372012
Computational Design of Thermostabilizing d-Amino Acid Substitutions
A Rodriguez-Granillo, S Annavarapu, L Zhang, RL Koder, V Nanda
Journal of the American Chemical Society 133 (46), 18750-18759, 2011
362011
Melittin as model system for probing interactions between proteins and cyclodextrins
M Khajehpour, T Troxler, V Nanda, JM Vanderkooi
Proteins: Structure, Function, and Bioinformatics 55 (2), 275-287, 2004
362004
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