Mark Diekhans
Mark Diekhans
University of California, Santa Cruz; UC Santa Cruz Genomics Institute
Verified email at soe.ucsc.edu
Title
Cited by
Cited by
Year
An integrated encyclopedia of DNA elements in the human genome
ENCODE Project Consortium
Nature 489 (7414), 57, 2012
118992012
Initial sequencing and comparative analysis of the mouse genome
RH Waterston, L Pachter
Nature 420 (6915), 520-562, 2002
73912002
GENCODE: the reference human genome annotation for The ENCODE Project
J Harrow, A Frankish, JM Gonzalez, E Tapanari, M Diekhans, ...
Genome research 22 (9), 1760-1774, 2012
40332012
The UCSC genome browser database
D Karolchik, R Baertsch, M Diekhans, TS Furey, A Hinrichs, YT Lu, ...
Nucleic acids research 31 (1), 51-54, 2003
16902003
The UCSC genome browser database: update 2011
PA Fujita, B Rhead, AS Zweig, AS Hinrichs, D Karolchik, MS Cline, ...
Nucleic acids research 39 (suppl_1), D876-D882, 2010
11972010
The UCSC genome browser database: update 2006
AS Hinrichs, D Karolchik, R Baertsch, GP Barber, G Bejerano, H Clawson, ...
Nucleic acids research 34 (suppl_1), D590-D598, 2006
9592006
Using native and syntenically mapped cDNA alignments to improve de novo gene finding
M Stanke, M Diekhans, R Baertsch, D Haussler
Bioinformatics 24 (5), 637-644, 2008
9362008
The UCSC genome browser database: 2015 update
KR Rosenbloom, J Armstrong, GP Barber, J Casper, H Clawson, ...
Nucleic acids research 43 (D1), D670-D681, 2015
9212015
GENCODE reference annotation for the human and mouse genomes
A Frankish, M Diekhans, AM Ferreira, R Johnson, I Jungreis, J Loveland, ...
Nucleic acids research 47 (D1), D766-D773, 2019
8632019
The UCSC Genome Browser database: extensions and updates 2013
LR Meyer, AS Zweig, AS Hinrichs, D Karolchik, RM Kuhn, M Wong, ...
Nucleic acids research 41 (D1), D64-D69, 2012
8092012
ENCODE data in the UCSC Genome Browser: year 5 update
KR Rosenbloom, CA Sloan, VS Malladi, TR Dreszer, K Learned, ...
Nucleic acids research 41 (D1), D56-D63, 2012
7482012
The UCSC genome browser database: 2014 update
D Karolchik, GP Barber, J Casper, H Clawson, MS Cline, M Diekhans, ...
Nucleic acids research 42 (D1), D764-D770, 2014
7272014
The UCSC genome browser database: update 2010
B Rhead, D Karolchik, RM Kuhn, AS Hinrichs, AS Zweig, PA Fujita, ...
Nucleic acids research 38 (suppl_1), D613-D619, 2010
7072010
A discriminative framework for detecting remote protein homologies
T Jaakkola, M Diekhans, D Haussler
Journal of computational biology 7 (1-2), 95-114, 2000
6652000
Multiple evidence strands suggest that there may be as few as 19 000 human protein-coding genes
I Ezkurdia, D Juan, JM Rodriguez, A Frankish, M Diekhans, J Harrow, ...
Human molecular genetics 23 (22), 5866-5878, 2014
6062014
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)
DS Gerhard, L Wagner, EA Feingold, CM Shenmen, LH Grouse, ...
Genome research 14 (10 B), 2121-2127, 2004
5852004
Using the Fisher kernel method to detect remote protein homologies.
TS Jaakkola, M Diekhans, D Haussler
ISMB 99, 149-158, 1999
5841999
The UCSC genome browser database: 2008 update
D Karolchik, RM Kuhn, R Baertsch, GP Barber, H Clawson, M Diekhans, ...
Nucleic acids research 36 (suppl_1), D773-D779, 2007
5762007
The UCSC known genes
F Hsu, WJ Kent, H Clawson, RM Kuhn, M Diekhans, D Haussler
Bioinformatics 22 (9), 1036-1046, 2006
5682006
The consensus coding sequence (CCDS) project: Identifying a common protein-coding gene set for the human and mouse genomes
KD Pruitt, J Harrow, RA Harte, C Wallin, M Diekhans, DR Maglott, ...
Genome research 19 (7), 1316-1323, 2009
5602009
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Articles 1–20