|In Situ Capture of Chromatin Interactions by Biotinylated dCas9|
X Liu, Y Zhang, Y Chen, M Li, F Zhou, K Li, H Cao, M Ni, Y Liu, Z Gu, ...
Cell 170 (5), 1028-1043. e19, 2017
|The mitochondrial respiratory chain is essential for haematopoietic stem cell function|
E Ansó, SE Weinberg, LP Diebold, BJ Thompson, S Malinge, ...
Nature cell biology 19 (6), 614-625, 2017
|Dynamic control of enhancer repertoires drives lineage and stage-specific transcription during hematopoiesis|
J Huang, X Liu, D Li, Z Shao, H Cao, Y Zhang, E Trompouki, TV Bowman, ...
Developmental cell 36 (1), 9-23, 2016
|Dissecting super-enhancer hierarchy based on chromatin interactions|
J Huang, K Li, W Cai, X Liu, Y Zhang, SH Orkin, J Xu, GC Yuan
Nature communications 9 (1), 1-12, 2018
|Regulation of mitochondrial biogenesis in erythropoiesis by mTORC1-mediated protein translation|
X Liu, Y Zhang, M Ni, H Cao, RAJ Signer, D Li, M Li, Z Gu, Z Hu, ...
Nature cell biology 19 (6), 626-638, 2017
|NF-κB signaling relieves negative regulation by miR-194 in hepatocellular carcinoma by suppressing the transcription factor HNF-1α|
C Bao, Y Li, L Huan, Y Zhang, F Zhao, Q Wang, L Liang, J Ding, L Liu, ...
Science signaling 8 (387), ra75-ra75, 2015
|Regulation of embryonic haematopoietic multipotency by EZH1|
LT Vo, MA Kinney, X Liu, Y Zhang, J Barragan, PM Sousa, DK Jha, A Han, ...
Nature 553 (7689), 506-510, 2018
|Upregulation of miR‐23a∼ 27a∼ 24 decreases transforming growth factor‐beta‐induced tumor‐suppressive activities in human hepatocellular carcinoma cells|
S Huang, X He, J Ding, L Liang, Y Zhao, Z Zhang, X Yao, Z Pan, P Zhang, ...
International Journal of Cancer 123 (4), 972-978, 2008
|Extensive increase of microarray signals in cancers calls for novel normalization assumptions|
D Wang, L Cheng, M Wang, R Wu, P Li, B Li, Y Zhang, Y Gu, W Zhao, ...
Computational biology and chemistry 35 (3), 126-130, 2011
|Extracting a few functionally reproducible biomarkers to build robust subnetwork-based classifiers for the diagnosis of cancer|
L Zhang, S Li, C Hao, G Hong, J Zou, Y Zhang, P Li, Z Guo
Gene 526 (2), 232-238, 2013
|A relative ordering-based predictor for tamoxifen-treated estrogen receptor-positive breast cancer patients: multi-laboratory cohort validation|
X Zhou, B Li, Y Zhang, Y Gu, B Chen, T Shi, L Ao, P Li, S Li, C Liu, Z Guo
Breast cancer research and treatment 142 (3), 505-514, 2013
|Temporal dynamics of cardiac hypertrophic growth in response to pressure overload|
Y Wang, Y Zhang, G Ding, HI May, J Xu, TG Gillette, H Wang, ZV Wang
American Journal of Physiology-Heart and Circulatory Physiology 313 (6 …, 2017
|Comparison of different normalization assumptions for analyses of DNA methylation data from the cancer genome|
D Wang, Y Zhang, Y Huang, P Li, M Wang, R Wu, L Cheng, W Zhang, ...
Gene 506 (1), 36-42, 2012
|Analysis of pathway mutation profiles highlights collaboration between cancer‐associated superpathways|
Y Gu, W Zhao, J Xia, Y Zhang, R Wu, C Wang, Z Guo
Human mutation 32 (9), 1028-1035, 2011
|Integrative analysis of transcriptional regulatory network and copy number variation in intrahepatic cholangiocarcinoma|
L Li, B Lian, C Li, W Li, J Li, Y Zhang, X He, Y Li, L Xie
PloS one 9 (6), e98653, 2014
|Genes dysregulated to different extent or oppositely in estrogen receptor-positive and estrogen receptor-negative breast cancers|
X Zhou, T Shi, B Li, Y Zhang, X Shen, H Li, G Hong, C Liu, Z Guo
PLoS One 8 (7), e70017, 2013
|Evaluation of cDNA microarray data by multiple clones mapping to the same transcript|
D Wang, C Wang, L Zhang, H Xiao, X Shen, L Ren, W Zhao, G Hong, ...
OMICS A Journal of Integrative Biology 13 (6), 493-499, 2009
|Pitfalls in experimental designs for characterizing the transcriptional, methylational and copy number changes of oncogenes and tumor suppressor genes|
Y Zhang, J Xia, Y Zhang, Y Qin, D Yang, L Qi, W Zhao, C Wang, Z Guo
Plos one 8 (3), e58163, 2013
|Targeting the Epigenetic and Metabolic Vulnerabilities of Ezh2-Deficiency-Induced Myeloid Neoplasms|
Z Gu, Y Liu, H Cao, M Chen, Y Zhang, L Qi, X Liu, K Li, K Dickerson, F Cai, ...
Blood 130, 380, 2017
|Mitochondria Coordinate Intracellular Metabolism and Epigenetic Gene Regulation during Erythropoiesis|
X Liu, Y Zhang, M Ni, H Cao, R Signer, D Li, Z Gu, Z Hu, N Chandel, ...
Blood 128 (22), 1038, 2016