Gender bias in autoimmunity is influenced by microbiota L Yurkovetskiy, M Burrows, AA Khan, L Graham, P Volchkov, L Becker, ... Immunity 39 (2), 400-412, 2013 | 902 | 2013 |
Transfection of small RNAs globally perturbs gene regulation by endogenous microRNAs AA Khan, D Betel, ML Miller, C Sander, CS Leslie, DS Marks Nature biotechnology 27 (6), 549-555, 2009 | 648 | 2009 |
Lactobacillus rhamnosus GG-supplemented formula expands butyrate-producing bacterial strains in food allergic infants R Berni Canani, N Sangwan, AT Stefka, R Nocerino, L Paparo, R Aitoro, ... The ISME journal 10 (3), 742-750, 2016 | 526 | 2016 |
Genome-wide RNA-mediated interference screen identifies miR-19 targets in Notch-induced T-cell acute lymphoblastic leukaemia KJ Mavrakis, AL Wolfe, E Oricchio, T Palomero, K De Keersmaecker, ... Nature cell biology 12 (4), 372-379, 2010 | 416 | 2010 |
Transcriptome-wide miR-155 Binding Map Reveals Widespread Noncanonical MicroRNA Targeting GB Loeb, AA Khan, D Canner, JB Hiatt, J Shendure, RB Darnell, ... Molecular Cell, 2012 | 376 | 2012 |
A genomic regulatory element that directs assembly and function of immune-specific AP-1-IRF complexes E Glasmacher, S Agrawal, AB Chang, TL Murphy, W Zeng, B Vander Lugt, ... Science, 2012 | 366 | 2012 |
Key parameters of tumor epitope immunogenicity revealed through a consortium approach improve neoantigen prediction DK Wells, MM van Buuren, KK Dang, VM Hubbard-Lucey, KCF Sheehan, ... Cell 183 (3), 818-834. e13, 2020 | 337 | 2020 |
A cooperative microRNA-tumor suppressor gene network in acute T-cell lymphoblastic leukemia (T-ALL) KJ Mavrakis, J Van Der Meulen, AL Wolfe, X Liu, E Mets, T Taghon, ... Nature genetics 43 (7), 673-678, 2011 | 330 | 2011 |
Predicting protein–protein interactions through sequence-based deep learning S Hashemifar, B Neyshabur, AA Khan, J Xu Bioinformatics 34 (17), i802-i810, 2018 | 317 | 2018 |
Transcriptional programming of dendritic cells for enhanced MHC class II antigen presentation B Vander Lugt, AA Khan, JA Hackney, S Agrawal, J Lesch, M Zhou, ... Nature immunology 15 (2), 161-167, 2014 | 288 | 2014 |
Specification of type 2 innate lymphocytes by the transcriptional determinant Gfi1 CJ Spooner, J Lesch, D Yan, AA Khan, A Abbas, V Ramirez-Carrozzi, ... Nature immunology 14 (12), 1229-1236, 2013 | 205 | 2013 |
Data based cancer research and treatment systems and methods S Colley, I Simpson, B Reuter, R Tell, H Lefkofsky, H Lane, K White, ... US Patent 11,705,226, 2023 | 150 | 2023 |
Induction of specific microRNAs inhibits cutaneous wound healing I Pastar, AA Khan, O Stojadinovic, EA Lebrun, MC Medina, H Brem, ... Journal of Biological Chemistry 287 (35), 29324-29335, 2012 | 145 | 2012 |
miR-23∼ 27∼ 24 clusters control effector T cell differentiation and function S Cho, CJ Wu, T Yasuda, LO Cruz, AA Khan, LL Lin, DT Nguyen, M Miller, ... Journal of Experimental Medicine 213 (2), 235-249, 2016 | 141 | 2016 |
Clinical validation of the tempus xT next-generation targeted oncology sequencing assay N Beaubier, R Tell, D Lau, JR Parsons, S Bush, J Perera, S Sorrells, ... Oncotarget 10 (24), 2384, 2019 | 138 | 2019 |
Integrated genomic profiling expands clinical options for patients with cancer N Beaubier, M Bontrager, R Huether, C Igartua, D Lau, R Tell, AM Bobe, ... Nature biotechnology 37 (11), 1351-1360, 2019 | 128 | 2019 |
Inferring transcriptional and microRNAmediated regulatory programs in glioblastoma M Setty, K Helmy, AA Khan, J Silber, A Arvey, F Neezen, P Agius, JT Huse, ... Molecular systems biology 8 (1), 605, 2012 | 109 | 2012 |
BASIC: BCR assembly from single cells S Canzar, KE Neu, Q Tang, PC Wilson, AA Khan Bioinformatics 33 (3), 425-427, 2017 | 102 | 2017 |
Gene regulatory networks in the immune system H Singh, AA Khan, AR Dinner Trends in immunology 35 (5), 211-218, 2014 | 89 | 2014 |
Transcriptional determinants of tolerogenic and immunogenic states during dendritic cell maturation B Vander Lugt, J Riddell, AA Khan, JA Hackney, J Lesch, J DeVoss, ... Journal of Cell Biology 216 (3), 779-792, 2017 | 86 | 2017 |