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Atul Rangadurai
Atul Rangadurai
CIHR postdoctoral fellow at the Hospital for Sick Children
Verified email at sickkids.ca
Title
Cited by
Cited by
Year
DNA mismatches reveal conformational penalties in protein–DNA recognition
A Afek, H Shi, A Rangadurai, H Sahay, A Senitzki, S Xhani, M Fang, ...
Nature 587 (7833), 291-296, 2020
852020
High-performance virtual screening by targeting a high-resolution RNA dynamic ensemble
LR Ganser, J Lee, A Rangadurai, DK Merriman, ML Kelly, AD Kansal, ...
Nature structural & molecular biology 25 (5), 425-434, 2018
832018
2′-O-Methylation can increase the abundance and lifetime of alternative RNA conformational states
H Abou Assi, AK Rangadurai, H Shi, B Liu, MC Clay, K Erharter, C Kreutz, ...
Nucleic acids research 48 (21), 12365-12379, 2020
752020
Characterizing micro-to-millisecond chemical exchange in nucleic acids using off-resonance R1ρ relaxation dispersion
A Rangadurai, ES Szymaski, IJ Kimsey, H Shi, HM Al-Hashimi
Progress in nuclear magnetic resonance spectroscopy 112, 55-102, 2019
652019
Insights into Watson–Crick/Hoogsteen breathing dynamics and damage repair from the solution structure and dynamic ensemble of DNA duplexes containing m1A
B Sathyamoorthy, H Shi, H Zhou, Y Xue, A Rangadurai, DK Merriman, ...
Nucleic acids research 45 (9), 5586-5601, 2017
652017
Rapid and accurate determination of atomistic RNA dynamic ensemble models using NMR and structure prediction
H Shi, A Rangadurai, H Abou Assi, R Roy, DA Case, D Herschlag, ...
Nature communications 11 (1), 5531, 2020
562020
NMR Chemical Exchange Measurements Reveal That N6-Methyladenosine Slows RNA Annealing
H Shi, B Liu, F Nussbaumer, A Rangadurai, C Kreutz, HM Al-Hashimi
Journal of the American Chemical Society 141 (51), 19988-19993, 2019
522019
Atomic structures of excited state A–T Hoogsteen base pairs in duplex DNA by combining NMR relaxation dispersion, mutagenesis, and chemical shift calculations
H Shi, MC Clay, A Rangadurai, B Sathyamoorthy, DA Case, ...
Journal of biomolecular NMR 70, 229-244, 2018
372018
Why are Hoogsteen base pairs energetically disfavored in A-RNA compared to B-DNA?
A Rangadurai, H Zhou, DK Merriman, N Meiser, B Liu, H Shi, ...
Nucleic acids research 46 (20), 11099-11114, 2018
302018
A quantitative model predicts how m6A reshapes the kinetic landscape of nucleic acid hybridization and conformational transitions
B Liu, H Shi, A Rangadurai, F Nussbaumer, CC Chu, KA Erharter, ...
Nature communications 12 (1), 5201, 2021
292021
Extending the sensitivity of CEST NMR spectroscopy to micro‐to‐millisecond dynamics in nucleic acids using high‐power radio‐frequency fields
A Rangadurai, H Shi, HM Al‐Hashimi
Angewandte Chemie International Edition 59 (28), 11262-11266, 2020
292020
Environmental effects on guanine-thymine mispair tautomerization explored with quantum mechanical/molecular mechanical free energy simulations
P Li, A Rangadurai, HM Al-Hashimi, S Hammes-Schiffer
Journal of the American Chemical Society 142 (25), 11183-11191, 2020
262020
Probing conformational transitions towards mutagenic Watson–Crick-like G·T mismatches using off-resonance sugar carbon R relaxation dispersion
A Rangadurai, ES Szymanski, I Kimsey, H Shi, HM Al-Hashimi
Journal of Biomolecular NMR 74, 457-471, 2020
252020
Mapping the per-residue surface electrostatic potential of CAPRIN1 along its phase-separation trajectory
Y Toyama, AK Rangadurai, JD Forman-Kay, LE Kay
Proceedings of the National Academy of Sciences 119 (36), e2210492119, 2022
232022
5‐Oxyacetic Acid Modification Destabilizes Double Helical Stem Structures and Favors Anionic Watson–Crick like cmo5U‐G Base Pairs
E Strebitzer, A Rangadurai, R Plangger, J Kremser, MA Juen, M Tollinger, ...
Chemistry–A European Journal 24 (71), 18903-18906, 2018
212018
Direct evidence for (G) O6··· H2-N4 (C)+ hydrogen bonding in transient G (syn)-C+ and G (syn)-m5C+ Hoogsteen base pairs in duplex DNA from cytosine amino nitrogen off-resonance …
A Rangadurai, J Kremser, H Shi, C Kreutz, HM Al-Hashimi
Journal of magnetic resonance 308, 106589, 2019
162019
Probing the hydrogen-bonding environment of individual bases in DNA duplexes with isotope-edited infrared spectroscopy
RJ Fick, AY Liu, F Nussbaumer, C Kreutz, A Rangadurai, Y Xu, ...
The Journal of Physical Chemistry B 125 (28), 7613-7627, 2021
142021
Measuring thermodynamic preferences to form non-native conformations in nucleic acids using ultraviolet melting
A Rangadurai, H Shi, Y Xu, B Liu, H Abou Assi, JD Boom, H Zhou, ...
Proceedings of the National Academy of Sciences 119 (24), e2112496119, 2022
10*2022
Surface electrostatics dictate RNA-binding protein CAPRIN1 condensate concentration and hydrodynamic properties
Y Toyama, AK Rangadurai, JD Forman-Kay, LE Kay
Journal of Biological Chemistry 299 (1), 2023
92023
Measurement of 1Hα transverse relaxation rates in proteins: application to solvent PREs
Y Toyama, AK Rangadurai, LE Kay
Journal of Biomolecular NMR 76 (4), 137-152, 2022
92022
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