Alejandro Schaffer
Alejandro Schaffer
Computer Scientist, National Institutes of Health
Verified email at - Homepage
Cited by
Cited by
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
SF Altschul, TL Madden, AA Schäffer, J Zhang, Z Zhang, W Miller, ...
Nucleic acids research 25 (17), 3389-3402, 1997
Inflammatory bowel disease and mutations affecting the interleukin-10 receptor
EO Glocker, D Kotlarz, K Boztug, EM Gertz, AA Schäffer, F Noyan, M Perro, ...
New England Journal of Medicine 361 (21), 2033-2045, 2009
Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements
AA Schäffer, L Aravind, TL Madden, S Shavirin, JL Spouge, YI Wolf, ...
Nucleic acids research 29 (14), 2994-3005, 2001
Faster sequential genetic linkage computations.
RW Cottingham Jr, RM Idury, AA Schäffer
American journal of human genetics 53 (1), 252, 1993
Database indexing for production MegaBLAST searches
A Morgulis, G Coulouris, Y Raytselis, TL Madden, R Agarwala, ...
Bioinformatics 24 (16), 1757-1764, 2008
STAT3 mutations in the hyper-IgE syndrome
SM Holland, FR DeLeo, HZ Elloumi, AP Hsu, G Uzel, N Brodsky, ...
New England Journal of Medicine 357 (16), 1608-1619, 2007
Protein database searches using compositionally adjusted substitution matrices
SF Altschul, JC Wootton, EM Gertz, R Agarwala, A Morgulis, AA Schäffer, ...
The FEBS journal 272 (20), 5101-5109, 2005
Mapping of a gene for Parkinson's disease to chromosome 4q21-q23
MH Polymeropoulos, JJ Higgins, LI Golbe, WG Johnson, SE Ide, ...
Science 274 (5290), 1197-1199, 1996
Homozygous loss of ICOS is associated with adult-onset common variable immunodeficiency
B Grimbacher, A Hutloff, M Schlesier, E Glocker, K Warnatz, R Dräger, ...
Nature immunology 4 (3), 261-268, 2003
A homozygous CARD9 mutation in a family with susceptibility to fungal infections
EO Glocker, A Hennigs, M Nabavi, AA Schäffer, C Woellner, U Salzer, ...
New England Journal of Medicine 361 (18), 1727-1735, 2009
Domain enhanced lookup time accelerated BLAST
GM Boratyn, AA Schäffer, R Agarwala, SF Altschul, DJ Lipman, ...
Biology direct 7, 1-14, 2012
Autosomal dominant immune dysregulation syndrome in humans with CTLA4 mutations
D Schubert, C Bode, R Kenefeck, TZ Hou, JB Wing, A Kennedy, ...
Nature medicine 20 (12), 1410-1416, 2014
Mutations in TNFRSF13B encoding TACI are associated with common variable immunodeficiency in humans
U Salzer, HM Chapel, ADB Webster, Q Pan-Hammarström, ...
Nature genetics 37 (8), 820-828, 2005
Avoiding recomputation in linkage analysis
AA Schaeffer, SK Gupta, K Shriram, RW Cottingham, Jr
Human heredity 44 (4), 225-237, 1994
Graph spanners
D Peleg, AA Schäffer
Journal of graph theory 13 (1), 99-116, 1989
HAX1 deficiency causes autosomal recessive severe congenital neutropenia (Kostmann disease)
C Klein, M Grudzien, G Appaswamy, M Germeshausen, I Sandrock, ...
Nature genetics 39 (1), 86-92, 2007
A genetic linkage map of microsatellites in the domestic cat (Felis catus)
M Menotti-Raymond, VA David, LA Lyons, AA Schäffer, JF Tomlin, ...
Genomics 57 (1), 9-23, 1999
Deleterious mutations in LRBA are associated with a syndrome of immune deficiency and autoimmunity
G Lopez-Herrera, G Tampella, Q Pan-Hammarström, P Herholz, ...
The American Journal of Human Genetics 90 (6), 986-1001, 2012
Localization of a gene for an autosomal recessive form of juvenile Parkinsonism to chromosome 6q25. 2-27.
H Matsumine, M Saito, S Shimoda-Matsubayashi, H Tanaka, A Ishikawa, ...
American journal of human genetics 60 (3), 588, 1997
Composition-based statistics and translated nucleotide searches: improving the TBLASTN module of BLAST
EM Gertz, YK Yu, R Agarwala, AA Schäffer, SF Altschul
BMC biology 4, 1-14, 2006
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