| CHARMM‐GUI: A web‐based graphical user interface for CHARMM S Jo, T Kim, VG Iyer, W Im Journal of computational chemistry 29 (11), 1859-1865, 2008 | 6019 | 2008 |
| CHARMM-GUI input generator for NAMD, GROMACS, AMBER, OpenMM, and CHARMM/OpenMM simulations using the CHARMM36 additive force field J Lee, X Cheng, JM Swails, MS Yeom, PK Eastman, JA Lemkul, S Wei, ... Journal of chemical theory and computation 12 (1), 405-413, 2016 | 2832 | 2016 |
| CHARMM‐GUI Membrane Builder toward realistic biological membrane simulations EL Wu, X Cheng, S Jo, H Rui, KC Song, EM Dávila‐Contreras, Y Qi, J Lee, ... Journal of computational chemistry 35 (27), 1997-2004, 2014 | 1921 | 2014 |
| CHARMM-GUI membrane builder for mixed bilayers and its application to yeast membranes S Jo, JB Lim, JB Klauda, W Im Biophysical journal 97 (1), 50-58, 2009 | 1473 | 2009 |
| Automated builder and database of protein/membrane complexes for molecular dynamics simulations S Jo, T Kim, W Im PloS one 2 (9), e880, 2007 | 1038 | 2007 |
| CHARMM-GUI Membrane Builder for Complex Biological Membrane Simulations with Glycolipids and Lipoglycans J Lee, DS Patel, J Ståhle, SJ Park, NR Kern, S Kim, J Lee, X Cheng, ... Journal of chemical theory and computation 15 (1), 775-786, 2018 | 384 | 2018 |
| CHARMM‐GUI ligand reader and modeler for CHARMM force field generation of small molecules S Kim, J Lee, S Jo, CL Brooks III, HS Lee, W Im Journal of computational chemistry 38 (21), 1879-1886, 2017 | 358 | 2017 |
| CHARMM‐GUI 10 years for biomolecular modeling and simulation S Jo, X Cheng, J Lee, S Kim, SJ Park, DS Patel, AH Beaven, KI Lee, H Rui, ... Journal of computational chemistry 38 (15), 1114-1124, 2017 | 257 | 2017 |
| PBEQ-Solver for online visualization of electrostatic potential of biomolecules S Jo, M Vargyas, J Vasko-Szedlar, B Roux, W Im Nucleic acids research 36 (suppl_2), W270-W275, 2008 | 253 | 2008 |
| CHARMM-GUI PDB manipulator for advanced modeling and simulations of proteins containing nonstandard residues S Jo, X Cheng, SM Islam, L Huang, H Rui, A Zhu, HS Lee, Y Qi, W Han, ... Advances in protein chemistry and structural biology 96, 235-265, 2014 | 238 | 2014 |
| CHARMM-GUI Glycan Modeler for modeling and simulation of carbohydrates and glycoconjugates SJ Park, J Lee, Y Qi, NR Kern, HS Lee, S Jo, IS Joung, K Joo, J Lee, W Im Glycobiology 29 (4), 320-331, 2019 | 237 | 2019 |
| Molecular dynamics and NMR spectroscopy studies of E. coli lipopolysaccharide structure and dynamics EL Wu, O Engström, S Jo, D Stuhlsatz, MS Yeom, JB Klauda, G Widmalm, ... Biophysical journal 105 (6), 1444-1455, 2013 | 191 | 2013 |
| Glycan Reader: automated sugar identification and simulation preparation for carbohydrates and glycoproteins S Jo, KC Song, H Desaire, AD MacKerell Jr, W Im Journal of computational chemistry 32 (14), 3135-3141, 2011 | 179 | 2011 |
| Constant-pH Molecular Dynamics Simulations for Large Biomolecular Systems BK Radak, C Chipot, D Suh, S Jo, W Jiang, JC Phillips, K Schulten, ... Journal of chemical theory and computation 13 (12), 5933-5944, 2017 | 161 | 2017 |
| Novel pyrrolopyrimidine-based α-helix mimetics: cell-permeable inhibitors of protein-protein interactions JH Lee, Q Zhang, S Jo, SC Chai, M Oh, W Im, H Lu, HS Lim Journal of the American Chemical Society 133 (4), 676, 2011 | 157 | 2011 |
| Cholesterol flip-flop: insights from free energy simulation studies S Jo, H Rui, JB Lim, JB Klauda, W Im The Journal of Physical Chemistry B 114 (42), 13342-13348, 2010 | 139 | 2010 |
| Exploring the conformational transitions of biomolecular systems using a simple two-state anisotropic network model A Das, M Gur, MH Cheng, S Jo, I Bahar, B Roux PLoS computational biology 10 (4), e1003521, 2014 | 123 | 2014 |
| CHARMM-GUI Micelle Builder for Pure/Mixed Micelle and Protein/Micelle Complex Systems X Cheng, S Jo, HS Lee, JB Klauda, W Im Journal of chemical information and modeling 53 (8), 2171-2180, 2013 | 102 | 2013 |
| Glycan Reader is improved to recognize most sugar types and chemical modifications in the Protein Data Bank SJ Park, J Lee, DS Patel, H Ma, HS Lee, S Jo, W Im Bioinformatics 33 (19), 3051-3057, 2017 | 99 | 2017 |
| CHARMM-GUI Ligand Binder for Absolute Binding Free Energy Calculations and Its Application S Jo, W Jiang, HS Lee, B Roux, W Im Journal of Chemical Information and Modeling, 2012 | 82 | 2012 |
Wonpil ImPresidential Endowed Chair and Professor of Biological Sciences, Lehigh UniversityVerified email at lehigh.edu
