Ian Sudbery
Ian Sudbery
Lecturer in Bioinfomatics, University of Sheffield
Verified email at sheffield.ac.uk
Title
Cited by
Cited by
Year
Sequencing depth and coverage: key considerations in genomic analyses
D Sims, I Sudbery, NE Ilott, A Heger, CP Ponting
Nature Reviews Genetics 15 (2), 121-132, 2014
9982014
Apoptosis induced by environmental stresses and amphotericin B in Candida albicans
AJ Phillips, I Sudbery, M Ramsdale
Proceedings of the National Academy of Sciences 100 (24), 14327-14332, 2003
3782003
KDM2B links the Polycomb Repressive Complex 1 (PRC1) to recognition of CpG islands
AM Farcas, NP Blackledge, I Sudbery, HK Long, JF McGouran, NR Rose, ...
elife 1, e00205, 2012
3192012
UMI-tools: modeling sequencing errors in Unique Molecular Identifiers to improve quantification accuracy
T Smith, A Heger, I Sudbery
Genome research 27 (3), 491-499, 2017
2792017
Next-generation sequencing of advanced prostate cancer treated with androgen-deprivation therapy
P Rajan, IM Sudbery, MEM Villasevil, E Mui, J Fleming, M Davis, I Ahmad, ...
European urology 66 (1), 32-39, 2014
1032014
High-throughput analysis of candidate imprinted genes and allele-specific gene expression in the human term placenta
C Daelemans, ME Ritchie, G Smits, S Abu-Amero, IM Sudbery, MS Forrest, ...
BMC genetics 11 (1), 25, 2010
762010
Next-generation sequencing of vertebrate experimental organisms
DJ Turner, TM Keane, I Sudbery, DJ Adams
Mammalian genome 20 (6), 327-338, 2009
522009
Systematic analysis of off-target effects in an RNAi screen reveals microRNAs affecting sensitivity to TRAIL-induced apoptosis
I Sudbery, AJ Enright, AG Fraser, I Dunham
BMC genomics 11 (1), 1-12, 2010
482010
CGAT: computational genomics analysis toolkit
D Sims, NE Ilott, SN Sansom, IM Sudbery, JS Johnson, KA Fawcett, ...
Bioinformatics 30 (9), 1290-1291, 2014
432014
Deep short-read sequencing of chromosome 17 from the mouse strains A/J and CAST/Ei identifies significant germline variation and candidate genes that regulate liver …
I Sudbery, J Stalker, JT Simpson, T Keane, AG Rust, ME Hurles, K Walter, ...
Genome Biology 10 (10), R112, 2009
382009
Alevin efficiently estimates accurate gene abundances from dscRNA-seq data
A Srivastava, L Malik, T Smith, I Sudbery, R Patro
Genome biology 20 (1), 1-16, 2019
282019
The m 6 A-methylase complex recruits TREX and regulates mRNA export
S Lesbirel, N Viphakone, M Parker, J Parker, C Heath, I Sudbery, ...
Scientific reports 8 (1), 1-12, 2018
252018
Identification of a candidate prognostic gene signature by transcriptome analysis of matched pre-and post-treatment prostatic biopsies from patients with advanced prostate cancer
P Rajan, J Stockley, IM Sudbery, JT Fleming, A Hedley, G Kalna, D Sims, ...
BMC cancer 14 (1), 1-10, 2014
242014
UCHL3 regulates topoisomerase-induced chromosomal break repair by controlling TDP1 proteostasis
C Liao, R Beveridge, JJR Hudson, JD Parker, SC Chiang, S Ray, ...
Cell reports 23 (11), 3352-3365, 2018
202018
Phosphoregulation of Nap1 plays a role in septin ring dynamics and morphogenesis in Candida albicans
ZX Huang, P Zhao, GS Zeng, YM Wang, I Sudbery, Y Wang
MBio 5 (1), 2014
202014
Cell cycle-independent phospho-regulation of Fkh2 during hyphal growth regulates Candida albicans pathogenesis
JA Greig, IM Sudbery, JP Richardson, JR Naglik, Y Wang, PE Sudbery
PLoS Pathog 11 (1), e1004630, 2015
132015
Co-transcriptional loading of RNA export factors shapes the human transcriptome
N Viphakone, I Sudbery, L Griffith, CG Heath, D Sims, SA Wilson
Molecular cell 75 (2), 310-323. e8, 2019
122019
Proteins that physically interact with the phosphatase Cdc14 in Candida albicans have diverse roles in the cell cycle
IN Kaneva, IM Sudbery, MJ Dickman, PE Sudbery
Scientific reports 9 (1), 1-12, 2019
42019
CGAT-core: A python framework for building scalable, reproducible computational biology workflows
AP Cribbs, S Luna-Valero, C George, IM Sudbery, AJ Berlanga-Taylor, ...
F1000Research 8 (377), 377, 2019
32019
Macrophage polarisation associated with atherosclerosis differentially affects their capacity to handle lipid
K Baidžajevas, É Hadadi, B Lee, J Lum, F Shihui, I Sudbery, E Kiss-Tóth, ...
Atherosclerosis, 2020
2020
The system can't perform the operation now. Try again later.
Articles 1–20