Stefan Bonn
Stefan Bonn
Professor for Medical Systems Biology, UKE and ZMN Hamburg
Verified email at - Homepage
Cited by
Cited by
Neuropathology of patients with COVID-19 in Germany: a post-mortem case series
J Matschke, M Lütgehetmann, C Hagel, JP Sperhake, AS Schröder, ...
The Lancet Neurology 19 (11), 919-929, 2020
Tissue-specific analysis of chromatin state identifies temporal signatures of enhancer activity during embryonic development
S Bonn, RP Zinzen, C Girardot, EH Gustafson, A Perez-Gonzalez, ...
Nature genetics 44 (2), 148-156, 2012
DNA methylation changes in plasticity genes accompany the formation and maintenance of memory
R Halder, M Hennion, RO Vidal, O Shomroni, RU Rahman, A Rajput, ...
Nature neuroscience 19 (1), 102-110, 2016
Precisely measured protein lifetimes in the mouse brain reveal differences across tissues and subcellular fractions
EF Fornasiero, S Mandad, H Wildhagen, M Alevra, B Rammner, S Keihani, ...
Nature communications 9 (1), 4230, 2018
A systematic screen for protein–lipid interactions in Saccharomyces cerevisiae
O Gallego, MJ Betts, J Gvozdenovic‐Jeremic, K Maeda, C Matetzki, ...
Molecular systems biology 6 (1), 430, 2010
HDAC inhibitor–dependent transcriptome and memory reinstatement in cognitive decline models
E Benito, H Urbanke, B Ramachandran, J Barth, R Halder, A Awasthi, ...
The Journal of clinical investigation 125 (9), 3572-3584, 2015
Realistic in silico generation and augmentation of single-cell RNA-seq data using generative adversarial networks
M Marouf, P Machart, V Bansal, C Kilian, DS Magruder, CF Krebs, S Bonn
Nature communications 11 (1), 166, 2020
Deep learning–based cell composition analysis from tissue expression profiles
K Menden, M Marouf, S Oller, A Dalmia, DS Magruder, K Kloiber, ...
Science advances 6 (30), eaba2619, 2020
Clonal expansion and activation of tissue-resident memory-like TH17 cells expressing GM-CSF in the lungs of patients with severe COVID-19
Y Zhao, C Kilian, JE Turner, L Bosurgi, K Roedl, P Bartsch, AC Gnirck, ...
Science Immunology 6 (56), eabf6692, 2021
Sodium butyrate rescues dopaminergic cells from alpha-synuclein-induced transcriptional deregulation and DNA damage
I Paiva, R Pinho, MA Pavlou, M Hennion, P Wales, AL Schütz, A Rajput, ...
Human molecular genetics 26 (12), 2231-2246, 2017
TAp73 is a central transcriptional regulator of airway multiciliogenesis
A Nemajerova, D Kramer, SS Siller, C Herr, O Shomroni, T Pena, ...
Genes & development 30 (11), 1300-1312, 2016
Functional hypoxia drives neuroplasticity and neurogenesis via brain erythropoietin
D Wakhloo, F Scharkowski, Y Curto, U Javed Butt, V Bansal, ...
Nature Communications 11 (1), 1313, 2020
Epigenetic alterations in longevity regulators, reduced life span, and exacerbated aging-related pathology in old father offspring mice
K Xie, DP Ryan, BL Pearson, KS Henzel, F Neff, RO Vidal, M Hennion, ...
Proceedings of the National Academy of Sciences 115 (10), E2348-E2357, 2018
Endophilin-A deficiency induces the Foxo3a-Fbxo32 network in the brain and causes dysregulation of autophagy and the ubiquitin-proteasome system
JD Murdoch, CM Rostosky, S Gowrisankaran, AS Arora, SF Soukup, ...
Cell reports 17 (4), 1071-1086, 2016
De-regulation of gene expression and alternative splicing affects distinct cellular pathways in the aging hippocampus
RM Stilling, E Benito, M Gertig, J Barth, V Capece, S Burkhardt, S Bonn, ...
Frontiers in cellular neuroscience 8, 373, 2014
Cell type–specific chromatin immunoprecipitation from multicellular complex samples using BiTS-ChIP
S Bonn, RP Zinzen, A Perez-Gonzalez, A Riddell, AC Gavin, EEM Furlong
Nature Protocols 7 (5), 978-994, 2012
Targeting myelin lipid metabolism as a potential therapeutic strategy in a model of CMT1A neuropathy
R Fledrich, T Abdelaal, L Rasch, V Bansal, V Schütza, B Brügger, ...
Nature communications 9 (1), 3025, 2018
Severe DCM phenotype of patient harboring RBM20 mutation S635A can be modeled by patient-specific induced pluripotent stem cell-derived cardiomyocytes
K Streckfuss-Bömeke, M Tiburcy, A Fomin, X Luo, W Li, C Fischer, ...
Journal of molecular and cellular cardiology 113, 9-21, 2017
Pathogen-induced tissue-resident memory TH17 (TRM17) cells amplify autoimmune kidney disease
CF Krebs, D Reimers, Y Zhao, HJ Paust, P Bartsch, S Nuñez, ...
Science Immunology 5 (50), eaba4163, 2020
Oasis 2: improved online analysis of small RNA-seq data
RU Rahman, A Gautam, J Bethune, A Sattar, M Fiosins, DS Magruder, ...
BMC bioinformatics 19, 1-10, 2018
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