Alejandro Fernandez Villaverde
Alejandro Fernandez Villaverde
IIM-CSIC
Bestätigte E-Mail-Adresse bei iim.csic.es - Startseite
Titel
Zitiert von
Zitiert von
Jahr
Reverse engineering and identification in systems biology: strategies, perspectives and challenges
AF Villaverde, JR Banga
Journal of the Royal Society Interface 11 (91), 20130505, 2014
2172014
MEIGO: an open-source software suite based on metaheuristics for global optimization in systems biology and bioinformatics
JA Egea, D Henriques, T Cokelaer, AF Villaverde, JR Banga, ...
BMC Bioinformatics 15, 136, 2014
1132014
Structural identifiability of dynamic systems biology models
AF Villaverde, A Barreiro, A Papachristodoulou
PLoS computational biology 12 (10), e1005153, 2016
1062016
MIDER: network inference with mutual information distance and entropy reduction
AF Villaverde, J Ross, F Morán, JR Banga
PloS one 9 (5), e96732, 2014
982014
Reset control for passive bilateral teleoperation
AF Villaverde, AB Blas, J Carrasco, AB Torrico
IEEE Transactions on Industrial Electronics 58 (7), 3037-3045, 2011
802011
BioPreDyn-bench: a suite of benchmark problems for dynamic modelling in systems biology
AF Villaverde, D Henriques, K Smallbone, S Bongard, J Schmid, ...
BMC systems biology 9 (1), 8, 2015
742015
A cooperative strategy for parameter estimation in large scale systems biology models
AF Villaverde, JA Egea, JR Banga
BMC systems biology 6 (1), 75, 2012
592012
Reverse engineering cellular networks with information theoretic methods
AF Villaverde, J Ross, JR Banga
Cells 2 (2), 306-329, 2013
582013
Parameter identifiability analysis and visualization in large-scale kinetic models of biosystems
A Gábor, AF Villaverde, JR Banga
BMC systems biology 11 (1), 1-16, 2017
482017
Benchmarking optimization methods for parameter estimation in large kinetic models
AF Villaverde, F Fröhlich, D Weindl, J Hasenauer, JR Banga
Bioinformatics 35 (5), 830–838, 2019
392019
On the relationship between sloppiness and identifiability
OT Chis, AF Villaverde, JR Banga, E Balsa-Canto
Mathematical biosciences 282, 147-161, 2016
362016
Data-driven reverse engineering of signaling pathways using ensembles of dynamic models
D Henriques, AF Villaverde, M Rocha, J Saez-Rodriguez, JR Banga
PLoS computational biology 13 (2), e1005379, 2017
312017
Global optimization in systems biology: stochastic methods and their applications
E Balsa-Canto, JR Banga, JA Egea, A Fernandez-Villaverde, ...
Advances in Systems Biology, 409-424, 2012
302012
Identifiability of large nonlinear biochemical networks
AF Villaverde, A Barreiro
University of Kragujevac, 2016
282016
Reset control for passive teleoperation
A Fernández, A Barreiro, A Banos, J Carrasco
Industrial Electronics, 2008. IECON 2008. 34th Annual Conference of IEEE …, 2008
252008
Metabolic engineering with multi-objective optimization of kinetic models
AF Villaverde, S Bongard, K Mauch, E Balsa-Canto, JR Banga
Journal of biotechnology 222, 1-8, 2016
242016
Multi-criteria optimization of regulation in metabolic networks
C Higuera, AF Villaverde, JR Banga, J Ross, F Morán
PLoS one 7 (7), e41122, 2012
242012
Observability and structural identifiability of nonlinear biological systems
AF Villaverde
Complexity 2019, 2019
202019
Enabling network inference methods to handle missing data and outliers
A Folch-Fortuny, AF Villaverde, A Ferrer, JR Banga
BMC bioinformatics 16 (1), 1-12, 2015
202015
A consensus approach for estimating the predictive accuracy of dynamic models in biology
AF Villaverde, S Bongard, K Mauch, D Müller, E Balsa-Canto, J Schmid, ...
Computer methods and programs in biomedicine 119 (1), 17-28, 2015
202015
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