Kate Rosenbloom
Kate Rosenbloom
UC Santa Cruz Genomics Institute, UCSC Genome Browser
Verified email at soe.ucsc.edu
Title
Cited by
Cited by
Year
An integrated encyclopedia of DNA elements in the human genome
ENCODE Project Consortium
Nature 489 (7414), 57, 2012
118992012
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
ENCODE Project Consortium
nature 447 (7146), 799, 2007
53432007
Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes
A Siepel, G Bejerano, JS Pedersen, AS Hinrichs, M Hou, K Rosenbloom, ...
Genome research 15 (8), 1034-1050, 2005
36202005
Aligning multiple genomic sequences with the threaded blockset aligner
M Blanchette, WJ Kent, C Riemer, L Elnitski, AFA Smit, KM Roskin, ...
Genome research 14 (4), 708-715, 2004
27072004
Genome sequence of the Brown Norway rat yields insights into mammalian evolution
RA Gibbs, L Pachter
Nature 428 (6982), 493-521, 2004
22202004
Initial sequence of the chimpanzee genome and comparison with the human genome
T Mikkelsen, LD Hillier, E Eichler, M Zody, D Jaffe, SP Yang, W Enard, ...
Nature 437 (7055), 69-87, 2005
19852005
Detection of nonneutral substitution rates on mammalian phylogenies
KS Pollard, MJ Hubisz, KR Rosenbloom, A Siepel
Genome research 20 (1), 110-121, 2010
17462010
A comparative encyclopedia of DNA elements in the mouse genome
F Yue, Y Cheng, A Breschi, J Vierstra, W Wu, T Ryba, R Sandstrom, Z Ma, ...
Nature 515 (7527), 355-364, 2014
14082014
Genetic effects on gene expression across human tissues
GTEx Consortium
Nature 550 (7675), 204, 2017
13362017
The UCSC genome browser database: update 2011
PA Fujita, B Rhead, AS Zweig, AS Hinrichs, D Karolchik, MS Cline, ...
Nucleic acids research 39 (suppl_1), D876-D882, 2010
11972010
The UCSC genome browser database: update 2006
AS Hinrichs, D Karolchik, R Baertsch, GP Barber, G Bejerano, H Clawson, ...
Nucleic acids research 34 (suppl_1), D590-D598, 2006
9592006
The UCSC genome browser database: 2015 update
KR Rosenbloom, J Armstrong, GP Barber, J Casper, H Clawson, ...
Nucleic acids research 43 (D1), D670-D681, 2015
9212015
The UCSC Genome Browser database: extensions and updates 2013
LR Meyer, AS Zweig, AS Hinrichs, D Karolchik, RM Kuhn, M Wong, ...
Nucleic acids research 41 (D1), D64-D69, 2012
8092012
ENCODE data in the UCSC Genome Browser: year 5 update
KR Rosenbloom, CA Sloan, VS Malladi, TR Dreszer, K Learned, ...
Nucleic acids research 41 (D1), D56-D63, 2012
7482012
The UCSC genome browser database: 2014 update
D Karolchik, GP Barber, J Casper, H Clawson, MS Cline, M Diekhans, ...
Nucleic acids research 42 (D1), D764-D770, 2014
7272014
The UCSC genome browser database: update 2010
B Rhead, D Karolchik, RM Kuhn, AS Hinrichs, AS Zweig, PA Fujita, ...
Nucleic acids research 38 (suppl_1), D613-D619, 2010
7072010
Identification and classification of conserved RNA secondary structures in the human genome
JS Pedersen, G Bejerano, A Siepel, K Rosenbloom, K Lindblad-Toh, ...
PLoS Comput Biol 2 (4), e33, 2006
6032006
The UCSC genome browser database: 2008 update
D Karolchik, RM Kuhn, R Baertsch, GP Barber, H Clawson, M Diekhans, ...
Nucleic acids research 36 (suppl_1), D773-D779, 2007
5762007
ENCODE whole-genome data in the UCSC Genome Browser: update 2012
KR Rosenbloom, TR Dreszer, JC Long, VS Malladi, CA Sloan, BJ Raney, ...
Nucleic acids research 40 (D1), D912-D917, 2012
538*2012
Forces shaping the fastest evolving regions in the human genome
KS Pollard, SR Salama, B King, AD Kern, T Dreszer, S Katzman, A Siepel, ...
PLoS Genet 2 (10), e168, 2006
4552006
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Articles 1–20