Anthony Bolger
Anthony Bolger
Verified email at bio1.rwth-aachen.de
Title
Cited by
Cited by
Year
Trimmomatic: a flexible trimmer for Illumina sequence data
AM Bolger, M Lohse, B Usadel
Bioinformatics 30 (15), 2114-2120, 2014
232862014
RobiNA: a user-friendly, integrated software solution for RNA-Seq-based transcriptomics
M Lohse, AM Bolger, A Nagel, AR Fernie, JE Lunn, M Stitt, B Usadel
Nucleic acids research 40 (W1), W622-W627, 2012
7832012
Comparative transcriptomics reveals patterns of selection in domesticated and wild tomato
D Koenig, JM Jiménez-Gómez, S Kimura, D Fulop, DH Chitwood, ...
Proceedings of the National Academy of Sciences 110 (28), E2655-E2662, 2013
3092013
The genome of the stress-tolerant wild tomato species Solanum pennellii
A Bolger, F Scossa, ME Bolger, C Lanz, F Maumus, T Tohge, ...
Nature genetics 46 (9), 1034-1038, 2014
2822014
De novo assembly of a new Solanum pennellii accession using nanopore sequencing
MHW Schmidt, A Vogel, AK Denton, B Istace, A Wormit, H van de Geest, ...
The Plant Cell 29 (10), 2336-2348, 2017
1212017
Evolution of a complex locus for terpene biosynthesis in Solanum
Y Matsuba, TTH Nguyen, K Wiegert, V Falara, E Gonzales-Vigil, B Leong, ...
The Plant Cell 25 (6), 2022-2036, 2013
1202013
Tomato facultative parthenocarpy results from SlAGAMOUS‐LIKE 6 loss of function
C Klap, E Yeshayahou, AM Bolger, T Arazi, SK Gupta, S Shabtai, ...
Plant biotechnology journal 15 (5), 634-647, 2017
1112017
MapMan4: a refined protein classification and annotation framework applicable to multi-omics data analysis
R Schwacke, GY Ponce-Soto, K Krause, AM Bolger, B Arsova, A Hallab, ...
Molecular plant 12 (6), 879-892, 2019
962019
Dual resistance of melon to Fusarium oxysporum races 0 and 2 and to Papaya ring-spot virus is controlled by a pair of head-to-head-oriented NB-LRR genes of unusual architecture
Y Brotman, M Normantovich, Z Goldenberg, Z Zvirin, I Kovalski, N Stovbun, ...
Molecular plant 6 (1), 235-238, 2013
662013
Algorithm-driven artifacts in median polish summarization of microarray data
FM Giorgi, AM Bolger, M Lohse, B Usadel
BMC bioinformatics 11 (1), 1-12, 2010
632010
Footprints of parasitism in the genome of the parasitic flowering plant Cuscuta campestris
A Vogel, R Schwacke, AK Denton, B Usadel, J Hollmann, K Fischer, ...
Nature communications 9 (1), 1-11, 2018
582018
Identification of candidate genes for phenolics accumulation in tomato fruit
A Di Matteo, V Ruggieri, A Sacco, MM Rigano, F Carriero, A Bolger, ...
Plant science 205, 87-96, 2013
432013
Computational aspects underlying genome to phenome analysis in plants
AM Bolger, H Poorter, K Dumschott, ME Bolger, D Arend, S Osorio, ...
The Plant Journal 97 (1), 182-198, 2019
282019
Fluctuating light interacts with time of day and leaf development stage to reprogram gene expression
T Schneider, A Bolger, J Zeier, S Preiskowski, V Benes, S Trenkamp, ...
Plant physiology 179 (4), 1632-1657, 2019
252019
Metabolic adaptation, a specialized leaf organ structure and vascular responses to diurnal N2 fixation by Nostoc azollae sustain the astonishing productivity of Azolla ferns …
P Brouwer, A Bräutigam, VA Buijs, AOE Tazelaar, A van der Werf, ...
Frontiers in plant science 8, 442, 2017
222017
Is there foul play in the leaf pocket? The metagenome of floating fern Azolla reveals endophytes that do not fix N2 but may denitrify
LW Dijkhuizen, P Brouwer, H Bolhuis, GJ Reichart, N Koppers, B Huettel, ...
New Phytologist 217 (1), 453-466, 2018
202018
Streptomyces thermoautotrophicus does not fix nitrogen
D MacKellar, L Lieber, JS Norman, A Bolger, C Tobin, JW Murray, ...
Scientific reports 6 (1), 1-12, 2016
152016
Reconstructing the gigabase plant genome of Solanum pennellii using Nanopore sequencing
MHW Schmidt, A Vogel, AK Denton, B Istace, A Wormit, H van de Geest, ...
Biorxiv, 129148, 2017
112017
De novo transcriptome analysis of durum wheat flag leaves provides new insights into the regulatory response to elevated CO2 and high temperature
R Vicente, AM Bolger, R Martínez-Carrasco, P Pérez, E Gutiérrez, ...
Frontiers in plant science 10, 1605, 2019
92019
Isolation of open chromatin identifies regulators of systemic acquired resistance
S Baum, EM Reimer-Michalski, A Bolger, AJ Mantai, V Benes, B Usadel, ...
Plant physiology 181 (2), 817-833, 2019
92019
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